RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 BPIFA4PQ86YQ2 179 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 PIMREGQ9BSJ6 248 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 CELSR3Q9NYQ7 3312 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 DSCAMO60469 2012 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 SGK494Q96LW2 274 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 CCL19Q99731 98 aa9.41□□□□□ -0.9
PDXDC1-217ENST00000570001 UBE2CO00762 179 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 VMO1Q7Z5L0 202 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 ARPC1AQ92747 370 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 ATP5J2P56134 94 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 UNQ5815/PRO19632Q6UWF5 114 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 EAF1Q96JC9 268 aaPredicted RBP9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 IL4P05112 153 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 HIF1ANQ9NWT6 349 aa9.4□□□□□ -0.9
PDXDC1-217ENST00000570001 ZNF785A8K8V0 405 aa9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 HOXA5P20719 270 aa9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 PRTN3P24158 256 aa9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 COX19Q49B96 90 aa9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 AARDQ4LEZ3 155 aa9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 F11RQ9Y624 299 aaKnown RBP9.4□□□□□ -0.91
PDXDC1-217ENST00000570001 P01737 135 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 CAMPP49913 170 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 SSTP61278 116 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 C22orf46C9J442 243 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PEX7O00628 323 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 CHEK1O14757 476 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PRR20EP86478 221 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PRR20CP86479 221 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PRR20DP86480 221 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PRR20BP86481 221 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PRR20AP86496 221 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 IL36BQ9NZH7 164 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 CLEC3BP05452 202 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 COL8A1P27658 744 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 TPPP2P59282 170 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
PDXDC1-217ENST00000570001 PHOX2AO14813 284 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 DEFA6Q01524 100 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 OR2J3O76001 311 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 COX6B1P14854 86 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 PLA2G5P39877 138 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 DOPEY2Q9Y3R5 2298 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 TMEM170AQ8WVE7 144 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 FAM168AQ92567 244 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 TRGV9Q99603 122 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 ZNF292O60281 2723 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 NTF3P20783 257 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 TMEM249Q2WGJ8 235 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 NDFIP1Q9BT67 221 aa9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 GSX1Q9H4S2 264 aaPredicted RBP9.38□□□□□ -0.91
PDXDC1-217ENST00000570001 CHD8Q9HCK8 2581 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 CFAP54Q96N23 3096 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 MFAP2P55001 183 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 TAS2R60P59551 318 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 C5orf17Q8NAS9 161 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 MRPL18Q9H0U6 180 aaKnown RBP9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 SPG11Q96JI7 2443 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 CBLN1P23435 193 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 C21orf62Q9NYP8 219 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 C9JCJ5 164 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 GOSR1O95249 250 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 IGHV3-23P01764 117 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 UQCRFS1P47985 274 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 C5orf64Q2M2E5 130 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 MS4A10Q96PG2 267 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 ARL2-SNX15V9GYD0 113 aa9.37□□□□□ -0.91
PDXDC1-217ENST00000570001 MINOS1Q5TGZ0 78 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 RITA1Q96K30 269 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 FNDC4Q9H6D8 234 aaPredicted RBP9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 MINOS1-NBL1R4GNA1 71 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 A0A087X0M5 115 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 A0A1B0GX30 115 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 MT-ND6P03923 174 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 PSG1P11464 419 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 GNG5P63218 68 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 C8orf46Q8TAG6 207 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 ZNF586Q9NXT0 402 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 OOSP1A8MZH6 123 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 ZNF253O75346 499 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 NDUFS7O75251 213 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms