RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 STXBP6Q8NFX7 210 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF503Q96F45 646 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TCEAL7Q9BRU2 100 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 SRD5A3Q9H8P0 318 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TPSG1Q9NRR2 321 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ONECUT1Q9UBC0 465 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 KLK9Q9UKQ9 250 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 YTHDF2Q9Y5A9 579 aaKnown RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 F11RQ9Y624 299 aaKnown RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 PKDREJQ9NTG1 2253 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TNCP24821 2201 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 HELTA6NFD8 242 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 H7BYZ3 331 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 C19orf84I3L1E1 186 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 I3L2K1 104 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 TIMM23O14925 209 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 LY6HO94772 140 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 S100A6P06703 90 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 OR10J4P0C629 311 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 GATA2P23769 480 aaPredicted RBP4.28□□□□□ -1.72
SF3B3-213ENST00000569687 S100PP25815 95 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 ZFP36P26651 326 aaKnown RBP4.28□□□□□ -1.72
SF3B3-213ENST00000569687 CNTFRP26992 372 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 TAS2R60P59551 318 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 UBE2G2P60604 165 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 LMO4P61968 165 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 TNXAQ16473 311 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
SF3B3-213ENST00000569687 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF562Q6V9R5 426 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 IQCF2Q8IXL9 164 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 ZFP82Q8N141 532 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 OR2T10Q8NGZ9 312 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 OR4X1Q8NH49 305 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
SF3B3-213ENST00000569687 ACY3Q96HD9 319 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 OR5B12Q96R08 314 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 SIRPDQ9H106 197 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 TNFRSF19Q9NS68 423 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 MRPL36Q9P0J6 103 aaKnown RBP4.28□□□□□ -1.72
SF3B3-213ENST00000569687 TBL2Q9Y4P3 447 aaKnown RBP4.28□□□□□ -1.72
SF3B3-213ENST00000569687 DMRT1Q9Y5R6 373 aa4.28□□□□□ -1.72
SF3B3-213ENST00000569687 TPRP12270 2363 aaKnown RBP4.27□□□□□ -1.73
SF3B3-213ENST00000569687 TRBV20OR9-2A0A075B6H5 130 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 IGHV2-70DA0A0C4DH43 119 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 SCO2A0A1W2PP80 73 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 NPIPB5A8MRT5 1133 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 NBR2O15453 112 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 COX7A2P2O60397 106 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 HYPMO75409 117 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 TRGC2P03986 189 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 S100A8P05109 93 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 FABP1P07148 127 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 RNF224P0DH78 156 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 MYCNOSP40205 109 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 GALR1P47211 349 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 CDX1P47902 265 aaPredicted RBP4.27□□□□□ -1.73
SF3B3-213ENST00000569687 UBE2E1P51965 193 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 DLX1P56177 255 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 BPIFB3P59826 476 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF90Q03938 601 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 KIAA0141Q14154 515 aaPredicted RBP4.27□□□□□ -1.73
SF3B3-213ENST00000569687 C5orf64Q2M2E5 130 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
SF3B3-213ENST00000569687 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 VMO1Q7Z5L0 202 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 TTC9CQ8N5M4 171 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 C2CD4CQ8TF44 421 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 C22orf15Q8WYQ4 148 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 FXYD5Q96DB9 178 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 PERPQ96FX8 193 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 SFRP2Q96HF1 295 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 AJUBAQ96IF1 538 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
SF3B3-213ENST00000569687 SLC25A2Q9BXI2 301 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 OR51M1Q9H341 326 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 FBXL15Q9H469 300 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 URGCP-MRPS24S4R325 110 aa4.27□□□□□ -1.73
SF3B3-213ENST00000569687 ABCA4P78363 2273 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 KMT2BQ9UMN6 2715 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 LRBAP50851 2863 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 CACNA1BQ00975 2339 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 TRAV30A0A087WSZ9 112 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 TRAV5A0A0B4J249 113 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF98A6NK75 572 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 K7EIM0 57 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 NDUFS8O00217 210 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 NDUFS7O75251 213 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 CNIH1O95406 144 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 GCGP01275 180 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 REG1AP05451 166 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 S100A9P06702 114 aaKnown RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 IGLC1P0CG04 106 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 FAM106CPP0CH98 169 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 MALP21145 153 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms