RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ST8SIA2Q92186 375 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 NPIPB3Q92617 1050 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 RNF2Q99496 336 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 TXN2Q99757 166 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 C7orf50Q9BRJ6 194 aaKnown RBP6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 RHPN1-AS1Q9BWJ2 59 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 RETNQ9HD89 108 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 GAR1Q9NY12 217 aaKnown RBP6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 SIGLEC8Q9NYZ4 499 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 HSPB7Q9UBY9 170 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 TMED3Q9Y3Q3 217 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 IGHV7-4-1A0A0J9YVY3 117 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 RPS10-NUDT3A0A1W2PQS6 291 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 INS-IGF2F8WCM5 200 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 SSSCA1O60232 199 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 CLN5O75503 358 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 IFNA21P01568 189 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 H2AFB2P0C5Z0 115 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 POLR2GP62487 172 aaKnown RBP eCLIP6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 OR2F1Q13607 317 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 BSXQ3C1V8 233 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 AARDQ4LEZ3 155 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 ZNF600Q6ZNG1 722 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 SLC16A13Q7RTY0 426 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 OR10C1Q96KK4 312 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 CCDC32Q9BV29 185 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 PTTG2Q9NZH5 202 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 SMPXQ9UHP9 88 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 TBC1D24Q9ULP9 559 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 U3KQK5 164 aa6.77□□□□□ -1.33
GTF3C1-210ENST00000569394 DUXBA0A1W2PPF3 345 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 SMCO3A2RU48 225 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 C5orf51A6NDU8 294 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 C15orf62A8K5M9 175 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 CHEK1O14757 476 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 SYNGR2O43760 224 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 PITX3O75364 302 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 C8orf88P0DMB2 117 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 OR10J1P30954 320 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 ELLP55199 621 aaPredicted RBP6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 IFITM3Q01628 133 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 ZNF124Q15973 351 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 PVRIGQ6DKI7 326 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 LAMTOR1Q6IAA8 161 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 MZT2BQ6NZ67 158 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 TCF24Q7RTU0 167 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 APRG1Q8IVJ8 170 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 LRTM2Q8N967 370 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 OR2K2Q8NGT1 345 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 OR4X1Q8NH49 305 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 ENKURQ8TC29 256 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 PBDC1Q9BVG4 233 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 LSM5Q9Y4Y9 91 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 U3KQ87 197 aa6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-210ENST00000569394 RBMY1BA6NDE4 496 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RBMY1EA6NEQ0 496 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 ZFP92A6NM28 416 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 K7EMT4 169 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 DNASE2O00115 360 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 MED6O75586 246 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 UPK1BO75841 260 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 CCNKO75909 580 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 DFFBO76075 338 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 IGKV1-17P01599 117 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 IL4P05112 153 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RBMY1DP0C7P1 496 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 IGLC1P0CG04 106 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RPL35AP18077 110 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 FCGR2BP31994 310 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 NKX2-1P43699 371 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RRAS2P62070 204 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RAB11AP62491 216 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 ZNF90Q03938 601 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 HAGHQ16775 308 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 IAH1Q2TAA2 248 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 OR8G2PQ6IF36 304 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 ETFRF1Q6IPR1 90 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 NOXA1Q86UR1 476 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 OR1S2Q8NGQ3 325 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RNASEH2CQ8TDP1 164 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 Q8WTZ3 238 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 MARC2Q969Z3 335 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 SLC35E1Q96K37 410 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RCHY1Q96PM5 261 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 METTL26Q96S19 204 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 GINS3Q9BRX5 216 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 WDR12Q9GZL7 423 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 ZMAT4Q9H898 229 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 PSENENQ9NZ42 101 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 RABAC1Q9UI14 185 aa6.75□□□□□ -1.33
GTF3C1-210ENST00000569394 TRAV30A0A087WSZ9 112 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms