RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 J3KRW8 73 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 S100A11P31949 105 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 NUP62P37198 522 aaPredicted RBP8.08□□□□□ -1.12
CDH3-210ENST00000569117 CDX1P47902 265 aaPredicted RBP8.08□□□□□ -1.12
CDH3-210ENST00000569117 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 NHLH2Q02577 135 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 VWC2Q2TAL6 325 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 ZNF343Q6P1L6 599 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 TMEM217Q8N7C4 229 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 TMEM116Q8NCL8 245 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 OR1S2Q8NGQ3 325 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 OR5C1Q8NGR4 320 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 ZNF502Q8TBZ5 544 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 C4orf3Q8WVX3 66 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 SLC35E1Q96K37 410 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 HYLS1Q96M11 299 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 TXN2Q99757 166 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
CDH3-210ENST00000569117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.07□□□□□ -1.12
CDH3-210ENST00000569117 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 LGALS1P09382 135 aaKnown RBP8.07□□□□□ -1.12
CDH3-210ENST00000569117 RND2P52198 227 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 MFAP4P55083 255 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 RUNX1Q01196 453 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 OR2F1Q13607 317 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 GAMTQ14353 236 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 OR4X1Q8NH49 305 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 CITED1Q99966 193 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 CITED2Q99967 270 aaPredicted RBP8.07□□□□□ -1.12
CDH3-210ENST00000569117 TMEM147Q9BVK8 224 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 GNB4Q9HAV0 340 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 ZC4H2Q9NQZ6 224 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 GAR1Q9NY12 217 aaKnown RBP8.07□□□□□ -1.12
CDH3-210ENST00000569117 MRPL36Q9P0J6 103 aaKnown RBP8.07□□□□□ -1.12
CDH3-210ENST00000569117 FBXL17Q9UF56 701 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 S4R3C0 116 aa8.07□□□□□ -1.12
CDH3-210ENST00000569117 TCRBV4S1A1TA0A5B7 111 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 CLN5O75503 358 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 IGHV3-11P01762 117 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 IGHV3-48P01763 117 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 NPBWR1P48145 328 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 AKR1C1Q04828 323 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 MLANAQ16655 118 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 ATP6V1FQ16864 119 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 NDUFA11Q86Y39 141 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 THAP8Q8NA92 274 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 BSCL2Q96G97 398 aaPredicted RBP8.06□□□□□ -1.12
CDH3-210ENST00000569117 ACY3Q96HD9 319 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 ATP5SQ99766 215 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 UQCC1Q9NVA1 299 aa8.06□□□□□ -1.12
CDH3-210ENST00000569117 A0A0D9SG52 128 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 UBE2L5PA0A1B0GUS4 154 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 SMCO3A2RU48 225 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 I3L521 148 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 GNG7O60262 68 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 SCGB2A1O75556 95 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 DFFBO76075 338 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 IGHV3-23P01764 117 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 IGLC1P0CG04 106 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 CXCL2P19875 107 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 GPR183P32249 361 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 EIF2B2P49770 351 aaKnown RBP8.05□□□□□ -1.12
CDH3-210ENST00000569117 AP2S1P53680 142 aaPredicted RBP8.05□□□□□ -1.12
CDH3-210ENST00000569117 CLINT1Q14677 625 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 Q56UQ5 140 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 SPSB3Q6PJ21 355 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 TMEM144Q7Z5S9 345 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 UBAC2Q8NBM4 344 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 KLHL30-AS1Q8NEE0 82 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 NPIPB3Q92617 1050 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 OR5B12Q96R08 314 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 ZNF747Q9BV97 191 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 WDR83OSQ9Y284 106 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 LSM4Q9Y4Z0 139 aaKnown RBP8.05□□□□□ -1.12
CDH3-210ENST00000569117 COL6A5A8TX70 2615 aa8.05□□□□□ -1.12
CDH3-210ENST00000569117 IGKV1D-37A0A075B6S9 117 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 IGKV1OR2-108A0A075B7D4 117 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 TRAV30A0A087WSZ9 112 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 OR2T8A6NH00 312 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 TAAR5O14804 337 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 TGOLN2O43493 480 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 TRBV12-3P01733 135 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 OR10J1P30954 320 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 ARL3P36405 182 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 ZNF266Q14584 549 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 HIST2H2BDQ6DRA6 164 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 CLEC19AQ6UXS0 136 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 C12orf54Q6X4T0 127 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 C9orf62Q8N4C0 152 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 PARD6GQ9BYG4 376 aaPredicted RBP8.04□□□□□ -1.12
CDH3-210ENST00000569117 SMIM3Q9BZL3 60 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 NPVFQ9HCQ7 196 aa8.04□□□□□ -1.12
CDH3-210ENST00000569117 PEF1Q9UBV8 284 aaKnown RBP8.04□□□□□ -1.12
CDH3-210ENST00000569117 A0A1W2PRX2 142 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms