RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	XCL2	Q9UBD3	114 aa		11.96	□□□□□ -0.49
PKM-223	ENST00000569050	RLN1	P04808	185 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	AKAIN1	P0CW23	69 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	PGAM2	P15259	253 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	HTN3	P15516	51 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	TBP	P20226	339 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	KRTAP10-2	P60368	255 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	SSBP1	Q04837	148 aa	Known RBP	11.95	□□□□□ -0.5
PKM-223	ENST00000569050	MSMO1	Q15800	293 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	PHLDA2	Q53GA4	152 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	AADACL3	Q5VUY0	350 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	TMEM88	Q6PEY1	159 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	OR1P1	Q8NH06	330 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	OR51H1	Q8NH63	302 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	DCANP1	Q8TF63	244 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	TRIM63	Q969Q1	353 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	MISP3	Q96FF7	219 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	TXN2	Q99757	166 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	SRR	Q9GZT4	340 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	BATF3	Q9NR55	127 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	NSG2	Q9Y328	171 aa		11.95	□□□□□ -0.5
PKM-223	ENST00000569050	DHRS11	Q6UWP2	260 aa		11.94	□□□□□ -0.5
PKM-223	ENST00000569050	PLEKHA2	Q9HB19	425 aa		11.94	□□□□□ -0.5
PKM-223	ENST00000569050	MCUB	Q9NWR8	336 aa		11.94	□□□□□ -0.5
PKM-223	ENST00000569050	DKK2	Q9UBU2	259 aa		11.94	□□□□□ -0.5
PKM-223	ENST00000569050	TMED3	Q9Y3Q3	217 aa		11.94	□□□□□ -0.5
PKM-223	ENST00000569050	OR51B2	Q9Y5P1	312 aa		11.94	□□□□□ -0.5
PKM-223	ENST00000569050	ANKRD20A5P	A0PJZ0	165 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	GNG7	O60262	68 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	MT-CO2	P00403	227 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	PI3	P19957	117 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	GNRHR	P30968	328 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	ETV6	P41212	452 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	CATR1	Q13166	79 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	MEF2D	Q14814	521 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	TRIQK	Q629K1	86 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.93	□□□□□ -0.5
PKM-223	ENST00000569050	ARRDC1	Q8N5I2	433 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	ZNRF2	Q8NHG8	242 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	RAB40C	Q96S21	281 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	NEU1	Q99519	415 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	NIPSNAP3B	Q9BS92	247 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	C1QTNF4	Q9BXJ3	329 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	TMEM231	Q9H6L2	316 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	PTTG2	Q9NZH5	202 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	COMMD9	Q9P000	198 aa		11.93	□□□□□ -0.5
PKM-223	ENST00000569050	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PKM-223	ENST00000569050	FLG2	Q5D862	2391 aa	Predicted RBP	11.93	□□□□□ -0.5
PKM-223	ENST00000569050	TMEM189	A5PLL7	270 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	MARCH11	A6NNE9	402 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.92	□□□□□ -0.5
PKM-223	ENST00000569050	DISC1	C4P0D8	188 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	GPR31	O00270	319 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	ZNF705D	P0CH99	300 aa	Predicted RBP	11.92	□□□□□ -0.5
PKM-223	ENST00000569050	ZNF705B	P0CI00	300 aa	Predicted RBP	11.92	□□□□□ -0.5
PKM-223	ENST00000569050	INPP1	P49441	399 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	FAM222A	Q5U5X8	452 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	TOMM5	Q8N4H5	51 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050	ZBTB34	Q8NCN2	500 aa		11.92	□□□□□ -0.5
PKM-223	ENST00000569050		A0A1B0GU03	582 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	LINC00854	A0A1B0GVQ3	168 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	DBX1	A6NMT0	343 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	ERVK-16	P61578	105 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	KLF9	Q13886	244 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-223	ENST00000569050	PSMG4	Q5JS54	123 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	LHFPL1	Q86WI0	220 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	CMTM1	Q8IZ96	169 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	OR51S1	Q8NGJ8	323 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	MARCH1	Q8TCQ1	289 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	BORCS5	Q969J3	196 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	ATG101	Q9BSB4	218 aa		11.91	□□□□□ -0.5
PKM-223	ENST00000569050	SRRM2	Q9UQ35	2752 aa	Known RBP	11.91	□□□□□ -0.5
PKM-223	ENST00000569050	P2RY1	P47900	373 aa		11.9	□□□□□ -0.5
PKM-223	ENST00000569050	NUTF2	P61970	127 aa	Known RBP	11.9	□□□□□ -0.5
PKM-223	ENST00000569050	BAK1	Q16611	211 aa		11.9	□□□□□ -0.5
PKM-223	ENST00000569050	ZNF600	Q6ZNG1	722 aa		11.9	□□□□□ -0.5
PKM-223	ENST00000569050	OR13C8	Q8NGS7	320 aa		11.9	□□□□□ -0.5
PKM-223	ENST00000569050	PINX1	Q96BK5	328 aa	Known RBP	11.9	□□□□□ -0.5
PKM-223	ENST00000569050	TMEM56	Q96MV1	263 aa		11.9	□□□□□ -0.5
PKM-223	ENST00000569050	SDHC	Q99643	169 aa	Predicted RBP	11.9	□□□□□ -0.5
PKM-223	ENST00000569050	TEX48	A0A1B0GUV7	120 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	PGLYRP1	O75594	196 aa	Predicted RBP	11.89	□□□□□ -0.51
PKM-223	ENST00000569050	S100G	P29377	79 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	FAU	P35544	74 aa	Known RBP	11.89	□□□□□ -0.51
PKM-223	ENST00000569050	AP3S2	P59780	193 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050		Q5VSD8	79 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	TBC1D26	Q86UD7	250 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	MRGPRF	Q96AM1	343 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	PRRT1	Q99946	306 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	RFNG	Q9Y644	331 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050	HMCN2	Q8NDA2	5059 aa		11.89	□□□□□ -0.51
PKM-223	ENST00000569050		A0A1W2PS18	150 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	NPPC	P23582	126 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	UCP3	P55916	312 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	PIGP	P57054	158 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	OXA1L	Q15070	435 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	LPCAT3	Q6P1A2	487 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	C15orf53	Q8NAA6	179 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	ZNF114	Q8NC26	417 aa		11.88	□□□□□ -0.51
PKM-223	ENST00000569050	TERB2	Q8NHR7	220 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms