RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 TMEM127O75204 238 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 AKR1C2P52895 323 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 TAS2R20P59543 309 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 GABARAPL2P60520 117 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 MLANAQ16655 118 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 TMEM69Q5SWH9 247 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 OR1S2Q8NGQ3 325 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 Q8WTZ3 238 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 FCGR1BQ92637 280 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 S100A16Q96FQ6 103 aaKnown RBP8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 YTHDF1Q9BYJ9 559 aaKnown RBP8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 ENY2Q9NPA8 101 aa8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 YTHDF2Q9Y5A9 579 aaKnown RBP8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
GTF3C1-209ENST00000568569 RPS10-NUDT3A0A1W2PQS6 291 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 GSTZ1O43708 216 aaPredicted RBP8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 IGKV1-5P01602 117 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 HBE1P02100 147 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 HLA-DMAP28067 261 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 ETV6P41212 452 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 HSPA13P48723 471 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 FXYD7P58549 80 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 TSPAN5P62079 268 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 SIGLEC15Q6ZMC9 328 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 GOLT1BQ9Y3E0 138 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 NACAE9PAV3 2078 aa8.34□□□□□ -1.07
GTF3C1-209ENST00000568569 LOC100506127A0A0U1RQW1 187 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 LOC102723971A0A1B0GUV8 181 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 BUB3O43684 328 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 ATG12O94817 140 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 IL4P05112 153 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 P0C879 139 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 OR10J1P30954 320 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 UCP3P55916 312 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 YPEL3P61236 119 aaPredicted RBP8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 DAD1P61803 113 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 DHODHQ02127 395 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 BSXQ3C1V8 233 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 UBE2NLQ5JXB2 153 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 GDF5OSQ5U4N7 250 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 GSG1LQ6UXU4 331 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 SPARTQ8N0X7 666 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 ZNF709Q8N972 641 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 VCX3BQ9H321 246 aa8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 SAV1Q9H4B6 383 aaPredicted RBP8.33□□□□□ -1.08
GTF3C1-209ENST00000568569 SLC25A4P12235 298 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 PRSS3P35030 304 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 ALDH3B2P48448 385 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 RND2P52198 227 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 RRN3P1Q2M238 152 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 LYSMD2Q8IV50 215 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 C7orf50Q9BRJ6 194 aaKnown RBP8.32□□□□□ -1.08
GTF3C1-209ENST00000568569 NUP62P37198 522 aaPredicted RBP8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 HTR2BP41595 481 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 DEFB1P60022 68 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 RND3P61587 244 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 SPATA12Q7Z6I5 190 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 CROCCP3Q8IVE0 287 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 OR4B1Q8NGF8 309 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 LINC00052Q96N35 136 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 SLC35B3Q9H1N7 401 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 SCPEP1Q9HB40 452 aa8.31□□□□□ -1.08
GTF3C1-209ENST00000568569 TOMM40O96008 361 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 RD3LP0DJH9 198 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 PGAM2P15259 253 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 ID1P41134 155 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 PSMB3P49720 205 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 PIGPP57054 158 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 PSG9Q00887 426 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 ZNF79Q15937 498 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 SPATA31B1PQ5VZV4 182 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 C1orf158Q8N1D5 194 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 SAMD12Q8N8I0 201 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 COQ8AQ8NI60 647 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 RNASEH2CQ8TDP1 164 aaKnown RBP8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 GPX8Q8TED1 209 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 TP53RKQ96S44 253 aa8.3□□□□□ -1.08
GTF3C1-209ENST00000568569 RCVRNP35243 200 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 RORCP51449 518 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 CCL18P55774 89 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 SPCS3P61009 180 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 TRIM16LQ309B1 348 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 ETFRF1Q6IPR1 90 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 RNASE11Q8TAA1 199 aaKnown RBP8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 ZNF486Q96H40 463 aaPredicted RBP8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 WDR12Q9GZL7 423 aaKnown RBP8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 MAGT1Q9H0U3 335 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 KLK11Q9UBX7 282 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 PFDN2Q9UHV9 154 aa8.29□□□□□ -1.08
GTF3C1-209ENST00000568569 A0A0G2JRQ6 117 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms