RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 RBMS2Q15434 407 aaKnown RBP7.09□□□□□ -1.27
SF3B3-211ENST00000568291 CNPY1Q3B7I2 92 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 C2orf83Q53S99 150 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 GGNBP1Q5YKI7 109 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 PRSS54Q6PEW0 395 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 SLC24A4Q8NFF2 622 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 DTD1Q8TEA8 209 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 ST8SIA2Q92186 375 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 NPIPB3Q92617 1050 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 ACY3Q96HD9 319 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 HIPK2Q9H2X6 1198 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 HSPB7Q9UBY9 170 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 A6NHS1 94 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 C15orf62A8K5M9 175 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 K7EMT4 169 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 CLN5O75503 358 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 IGKV1-17P01599 117 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 NPY1RP25929 384 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 FCGR2BP31994 310 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-211ENST00000568291 LINC00322Q6ZN03 302 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-211ENST00000568291 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 APRG1Q8IVJ8 170 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 OR4X1Q8NH49 305 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 OR10C1Q96KK4 312 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
SF3B3-211ENST00000568291 TRAV6A0A075B6T7 132 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 NAP1L6A6NFF2 107 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 WRBO00258 174 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 PITX3O75364 302 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 DFFBO76075 338 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 JTBO76095 146 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 IFNA4P05014 189 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 OR4E1P0C645 316 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 RPL35AP18077 110 aaKnown RBP7.07□□□□□ -1.28
SF3B3-211ENST00000568291 OR10J1P30954 320 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
SF3B3-211ENST00000568291 SRPXP78539 464 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 DHRS2Q13268 280 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 C4orf46Q504U0 113 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 LAMTOR1Q6IAA8 161 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 ZNF600Q6ZNG1 722 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 TCF24Q7RTU0 167 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 ATP6V0BQ99437 205 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 SACSQ9NZJ4 4579 aa7.07□□□□□ -1.28
SF3B3-211ENST00000568291 EPPK1P58107 5090 aaKnown RBP7.07□□□□□ -1.28
SF3B3-211ENST00000568291 TRAV25A0A0B4J276 109 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 CENPXA8MT69 81 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 H3BP45 60 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 CORTO00230 105 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 TSPAN4O14817 238 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 LYRM1O43325 122 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 IGLC1P0CG04 106 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 ODF3L2Q3SX64 289 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 LYG2Q86SG7 212 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 FAM24BQ8N5W8 94 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 LRTM2Q8N967 370 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 U3KQ87 197 aa7.06□□□□□ -1.28
SF3B3-211ENST00000568291 DNAH1Q9P2D7 4330 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 RPS10-NUDT3A0A1W2PQS6 291 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 CCSO14618 274 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 NPPCP23582 126 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 POLR2GP62487 172 aaKnown RBP eCLIP7.05□□□□□ -1.28
SF3B3-211ENST00000568291 ZNF90Q03938 601 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 OR2F1Q13607 317 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 GAMTQ14353 236 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 USF2Q15853 346 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-211ENST00000568291 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 FAM90A2PQ658T7 463 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 RNASEH2CQ8TDP1 164 aaKnown RBP7.05□□□□□ -1.28
SF3B3-211ENST00000568291 DEDD2Q8WXF8 326 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 SPAG8Q99932 426 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-211ENST00000568291 SEC22CQ9BRL7 303 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 C20orf85Q9H1P6 137 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 GSKIPQ9P0R6 139 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 RABAC1Q9UI14 185 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 TMED3Q9Y3Q3 217 aa7.05□□□□□ -1.28
SF3B3-211ENST00000568291 DUXBA0A1W2PPF3 345 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 SYNGR2O43760 224 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 CCNKO75909 580 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 SCGB1D2O95969 90 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 TCRBP04435 133 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 IL4P05112 153 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 RD3LP0DJH9 198 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 PSG1P11464 419 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 SLC25A4P12235 298 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 IFITM3Q01628 133 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 LEMD1Q68G75 181 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 OR51G1Q8NGK1 321 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 COQ8AQ8NI60 647 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 Q8WTZ3 238 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 GINS3Q9BRX5 216 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 PBDC1Q9BVG4 233 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 VSIRQ9H7M9 311 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 NUDT15Q9NV35 164 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 TBC1D24Q9ULP9 559 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
SF3B3-211ENST00000568291 IGKV1D-37A0A075B6S9 117 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 TRAV30A0A087WSZ9 112 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms