RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PPP1R32Q7Z5V6 425 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 PERPQ96FX8 193 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 MED13Q9UHV7 2174 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 CENPVQ7Z7K6 275 aaPredicted RBP8.97□□□□□ -0.97
PALB2-206ENST00000568219 WDR86Q86TI4 376 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 EML6Q6ZMW3 1958 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 SLC25A17O43808 307 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 ZNF146Q15072 292 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 PRSS57Q6UWY2 283 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 MTURNQ8N3F0 131 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 IFI27L2Q9H2X8 130 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 MYO15AQ9UKN7 3530 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 TRBV6-6A0A0A6YYG2 114 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 PAX1P15863 534 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 LINC00310P59036 64 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 CCL8P80075 99 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 HIST1H1AQ02539 215 aaPredicted RBP8.97□□□□□ -0.97
PALB2-206ENST00000568219 CCL17Q92583 94 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
PALB2-206ENST00000568219 JKAMPQ9P055 326 aa8.97□□□□□ -0.97
PALB2-206ENST00000568219 LOC102723996A0A087X1L8 192 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 SAA2-SAA4A0A096LPE2 208 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 TRAV8-6A0A0B4J262 113 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 TMEM238C9JI98 176 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 IGLV3-19P01714 112 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 SAA2P0DJI9 122 aaPredicted RBP8.96□□□□□ -0.97
PALB2-206ENST00000568219 CACNG7P62955 275 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 BVES-AS1Q5T3Y7 98 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 TMEM186Q96B77 213 aa8.96□□□□□ -0.97
PALB2-206ENST00000568219 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.97
PALB2-206ENST00000568219 LOC105371242A0A075B767 164 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 C15orf61A6NNL5 157 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 HES1Q14469 280 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 WDR82Q6UXN9 313 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 TEX45Q8NA69 505 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 GPR82Q96P67 336 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 NBEAQ8NFP9 2946 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 A0A0G2JLM5 398 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 PMS2P5A8MQ11 134 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 CKS2P33552 79 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 ZNF766Q5HY98 468 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 FER1L6-AS1Q8NA97 138 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 ITLN1Q8WWA0 313 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 SLC25A33Q9BSK2 321 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 S4R3C0 116 aa8.96□□□□□ -0.98
PALB2-206ENST00000568219 ATP1A1-AS1Q5TC04 95 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 TMEM178AQ8NBL3 297 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 JPT1Q9UK76 154 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 CIARTQ8N365 385 aaPredicted RBP8.95□□□□□ -0.98
PALB2-206ENST00000568219 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
PALB2-206ENST00000568219 LINC00470Q9BZP3 86 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 MRPL27Q9P0M9 148 aaKnown RBP8.95□□□□□ -0.98
PALB2-206ENST00000568219 PCNX2A6NKB5 2137 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 DYSFO75923 2080 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 ORM1P02763 201 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 MAFAQ8NHW3 353 aaPredicted RBP8.95□□□□□ -0.98
PALB2-206ENST00000568219 SAP25Q8TEE9 199 aa8.95□□□□□ -0.98
PALB2-206ENST00000568219 COL25A1Q9BXS0 654 aaPredicted RBP8.95□□□□□ -0.98
PALB2-206ENST00000568219 NHP2Q9NX24 153 aaKnown RBP8.95□□□□□ -0.98
PALB2-206ENST00000568219 CD5LO43866 347 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 TNFAIP6P98066 277 aaPredicted RBP8.94□□□□□ -0.98
PALB2-206ENST00000568219 ZNF414Q96IQ9 312 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 CSTL1Q9H114 145 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 EPDR1Q9UM22 224 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 CHD9Q3L8U1 2897 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 NUP210LQ5VU65 1888 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 K7EP13 123 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 CIDEAO60543 219 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 IGKV1-16P04430 117 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 TWIST1Q15672 202 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 VMA21Q3ZAQ7 101 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 INO80CQ6PI98 192 aaPredicted RBP8.94□□□□□ -0.98
PALB2-206ENST00000568219 RBPMS2Q6ZRY4 209 aaKnown RBP8.94□□□□□ -0.98
PALB2-206ENST00000568219 OR4F17Q8NGA8 305 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 WFDC12Q8WWY7 111 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 FER1L6-AS2Q96M78 137 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 FREM2Q5SZK8 3169 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 DLL1O00548 723 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 SMIM13P0DJ93 91 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 KIR3DS1Q14943 382 aa8.94□□□□□ -0.98
PALB2-206ENST00000568219 MBNL2Q5VZF2 373 aaKnown RBP8.94□□□□□ -0.98
PALB2-206ENST00000568219 TMEM265A0A087WTH1 108 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 IGHV3-35A0A0C4DH35 117 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 A0A1B0GUT8 65 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 NPIPB11E5RHQ5 1161 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 Q0VFX4 171 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 DSCAML1Q8TD84 2053 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 LOC107984156A0A0G2JMH3 177 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 TAX1BP3O14907 124 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 SAA1P0DJI8 122 aaPredicted RBP8.93□□□□□ -0.98
PALB2-206ENST00000568219 ARL17AQ8IVW1 177 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 CD177Q8N6Q3 437 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 FAM216BQ8N7L0 139 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 STXBP6Q8NFX7 210 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 C5orf30Q96GV9 206 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 PROCRQ9UNN8 238 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 TNFSF15O95150 251 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 DAZAP2Q15038 168 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms