RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 SMCO1Q147U7 214 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 USF2Q15853 346 aaPredicted RBP5.52□□□□□ -1.53
GINS3-207ENST00000567400 PYDC2Q56P42 97 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 LEMD1Q68G75 181 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 LYG2Q86SG7 212 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 RNASEH2CQ8TDP1 164 aaKnown RBP5.52□□□□□ -1.53
GINS3-207ENST00000567400 DCANP1Q8TF63 244 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 NPIPB3Q92617 1050 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 RNF183Q96D59 192 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 SRRQ9GZT4 340 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 RBKSQ9H477 322 aa5.52□□□□□ -1.53
GINS3-207ENST00000567400 HEYLQ9NQ87 328 aaPredicted RBP5.52□□□□□ -1.53
GINS3-207ENST00000567400 AGRNO00468 2067 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 IGKV1D-37A0A075B6S9 117 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 TRAV2A0A0B4J234 112 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 RPS10-NUDT3A0A1W2PQS6 291 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 K7EQG2 157 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 ZNF701M0R085 212 aaPredicted RBP5.51□□□□□ -1.53
GINS3-207ENST00000567400 CD5P06127 495 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 SLC25A4P12235 298 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 NPPCP23582 126 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 P2RY1P47900 373 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 CCR6P51684 374 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 DEFB131AP59861 70 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 YPEL3P61236 119 aaPredicted RBP5.51□□□□□ -1.53
GINS3-207ENST00000567400 PPP1R1AQ13522 171 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 RBMS2Q15434 407 aaKnown RBP5.51□□□□□ -1.53
GINS3-207ENST00000567400 TMEM128Q5BJH2 165 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 TMED4Q7Z7H5 227 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 LGI3Q8N145 548 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 TOMM5Q8N4H5 51 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 STPG3Q8N7X2 389 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 LRTM2Q8N967 370 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 DTD1Q8TEA8 209 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 GLMPQ8WWB7 406 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 SCGB3A2Q96PL1 93 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 METTL26Q96S19 204 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 SDHCQ99643 169 aaPredicted RBP5.51□□□□□ -1.53
GINS3-207ENST00000567400 KCNIP3Q9Y2W7 256 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 ALMS1Q8TCU4 4167 aa5.51□□□□□ -1.53
GINS3-207ENST00000567400 TRAV30A0A087WSZ9 112 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 CCDC160A6NGH7 325 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 IL4P05112 153 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 FAUP35544 74 aaKnown RBP5.5□□□□□ -1.53
GINS3-207ENST00000567400 AP3S2P59780 193 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
GINS3-207ENST00000567400 SRPXP78539 464 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 BAK1Q16611 211 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 STXBP6Q8NFX7 210 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 OR1S2Q8NGQ3 325 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 DEDD2Q8WXF8 326 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 ACY3Q96HD9 319 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 CSTL1Q9H114 145 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 RABAC1Q9UI14 185 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 U3KQ87 197 aa5.5□□□□□ -1.53
GINS3-207ENST00000567400 IGKV1OR2-108A0A075B7D4 117 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 DUXBA0A1W2PPF3 345 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 KNCNA6PVL3 124 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 MPTX1A8MV57 137 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 PRSS46E5RG02 174 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 DNASE2O00115 360 aaPredicted RBP5.49□□□□□ -1.53
GINS3-207ENST00000567400 SFT2D2O95562 160 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 TOMM40O96008 361 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 CA1P00915 261 aaPredicted RBP5.49□□□□□ -1.53
GINS3-207ENST00000567400 IFNA10P01566 189 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 HNRNPCP07910 306 aaKnown RBP eCLIP5.49□□□□□ -1.53
GINS3-207ENST00000567400 ZNF688P0C7X2 276 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 IAPPP10997 89 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 PSG1P11464 419 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 SLC25A6P12236 298 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 ATF4P18848 351 aaPredicted RBP5.49□□□□□ -1.53
GINS3-207ENST00000567400 C4BPBP20851 252 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 S100A5P33763 92 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 BTCP35070 178 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 PAFAH1B2P68402 229 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 ZNF90Q03938 601 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 PMS2P11Q13670 270 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 GAMTQ14353 236 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 C16orf54Q6UWD8 224 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
GINS3-207ENST00000567400 OR1S1Q8NH92 325 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 GRAMD2BQ96HH9 432 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 SLC25A21Q9BQT8 299 aaPredicted RBP5.49□□□□□ -1.53
GINS3-207ENST00000567400 TMEM231Q9H6L2 316 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 CACFD1Q9UGQ2 172 aa5.49□□□□□ -1.53
GINS3-207ENST00000567400 A0A1W2PS18 150 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 CXorf65A6NEN9 183 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 BUB3O43684 328 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 SCGB2A1O75556 95 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 RD3LP0DJH9 198 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 ANXA3P12429 323 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 CMC4P56277 68 aaPredicted RBP5.48□□□□□ -1.53
GINS3-207ENST00000567400 SPANXN2Q5MJ10 180 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 ETFRF1Q6IPR1 90 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 CENPSQ8N2Z9 138 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 Q8NAQ8 132 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 OR51G1Q8NGK1 321 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 Q8WTZ3 238 aa5.48□□□□□ -1.53
GINS3-207ENST00000567400 GATAD1Q8WUU5 269 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms