RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RPL7L1Q6DKI1 246 aaKnown RBP10.37□□□□□ -0.75
CLK3-218ENST00000566926 PVRIGQ6DKI7 326 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 OR8G2PQ6IF36 304 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 SLC25A24Q6NUK1 477 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 TTC9CQ8N5M4 171 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 ZNF680Q8NEM1 530 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 OR10W1Q8NGF6 305 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 LRRC20Q8TCA0 184 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 SMIM3Q9BZL3 60 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 AURKAIP1Q9NWT8 199 aaPredicted RBP10.37□□□□□ -0.75
CLK3-218ENST00000566926 UBQLN2Q9UHD9 624 aa10.37□□□□□ -0.75
CLK3-218ENST00000566926 RPS10-NUDT3A0A1W2PQS6 291 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 SEC14L6B5MCN3 397 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 E7EUB6 86 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 OVOL1O14753 267 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 IGHV3-11P01762 117 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 CRYGCP07315 174 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 ZP3P21754 424 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 HAPLN4Q86UW8 402 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 MRAPQ8TCY5 172 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 SCARB1Q8WTV0 552 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 KCNIP2Q9NS61 270 aa10.36□□□□□ -0.75
CLK3-218ENST00000566926 F11RQ9Y624 299 aaKnown RBP10.36□□□□□ -0.75
CLK3-218ENST00000566926 A0A1B0GW64 132 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 PRSS46E5RG02 174 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 PRB2P02812 416 aaPredicted RBP10.35□□□□□ -0.75
CLK3-218ENST00000566926 SEC11BP0C7V7 166 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 APELAP0DMC3 54 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 CTRB1P17538 263 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
CLK3-218ENST00000566926 IFITM2Q01629 132 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 RAB31Q13636 194 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 CTRB2Q6GPI1 263 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 THYN1Q9P016 225 aa10.35□□□□□ -0.75
CLK3-218ENST00000566926 IGHV4OR15-8A0A075B7B6 117 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 A0A087WW49 117 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 DEFA4P12838 97 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 HIST1H1BP16401 226 aaKnown RBP10.34□□□□□ -0.75
CLK3-218ENST00000566926 RAB5CP51148 216 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 RAB14P61106 215 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 CD69Q07108 199 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 BSCL2Q96G97 398 aaPredicted RBP10.34□□□□□ -0.75
CLK3-218ENST00000566926 SLC35E1Q96K37 410 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 PSMG3Q9BT73 122 aaPredicted RBP10.34□□□□□ -0.75
CLK3-218ENST00000566926 WDR61Q9GZS3 305 aaKnown RBP10.34□□□□□ -0.75
CLK3-218ENST00000566926 WFDC1Q9HC57 220 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 TIMM9Q9Y5J7 89 aa10.34□□□□□ -0.75
CLK3-218ENST00000566926 TRBV9A0A0B4J1U6 114 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 UBE2L5PA0A1B0GUS4 154 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 UMAD1C9J7I0 102 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 C17orf112F2Z3M2 114 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 SPP1P10451 314 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 AREGP15514 252 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 OPRK1P41145 380 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 SLURP1P55000 103 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 KRTAP10-11P60412 298 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 RHOGP84095 191 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 SERF2P84101 59 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 ATP5G2Q06055 141 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 ZNF343Q6P1L6 599 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 ZNF709Q8N972 641 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 NECAP1Q8NC96 275 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
CLK3-218ENST00000566926 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
CLK3-218ENST00000566926 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
CLK3-218ENST00000566926 TGP01266 2768 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 ANKRD34BA5PLL1 514 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 AKR1C1Q04828 323 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 KLK9Q2XQG4 91 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 TEPPQ6URK8 271 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 SLC16A13Q7RTY0 426 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 KLK9Q9UKQ9 250 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
CLK3-218ENST00000566926 SCGB2A1O75556 95 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 CFDP00746 253 aaPredicted RBP10.31□□□□□ -0.76
CLK3-218ENST00000566926 MBP02144 154 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 ATP6V0CP27449 155 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 ACSM6Q6P461 480 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 ALKAL2Q6UX46 152 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 DPPA3Q6W0C5 159 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 OR2G3Q8NGZ4 309 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 TMED6Q8WW62 240 aa10.31□□□□□ -0.76
CLK3-218ENST00000566926 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
CLK3-218ENST00000566926 DNAH3Q8TD57 4116 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 SMCO3A2RU48 225 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 K7EIL1 84 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 SAP30O75446 220 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms