RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 RND2P52198 227 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 SMCO1Q147U7 214 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 RBMS2Q15434 407 aaKnown RBP10.78□□□□□ -0.68
FANCA-220ENST00000566409 TOMM5Q8N4H5 51 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 STPG3Q8N7X2 389 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 RBKSQ9H477 322 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 U3KQE9 123 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 RPS10-NUDT3A0A1W2PQS6 291 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 CD5P06127 495 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 SLC25A4P12235 298 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 NPY1RP25929 384 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 BMI1P35226 326 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 CCR6P51684 374 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.69
FANCA-220ENST00000566409 PAFAH1B2P68402 229 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 TMED4Q7Z7H5 227 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 LYG2Q86SG7 212 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 LGI3Q8N145 548 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 METTL26Q96S19 204 aa10.77□□□□□ -0.69
FANCA-220ENST00000566409 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 PITX3O75364 302 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 OR10J1P30954 320 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 FAUP35544 74 aaKnown RBP10.76□□□□□ -0.69
FANCA-220ENST00000566409 DEFB131AP59861 70 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 YPEL3P61236 119 aaPredicted RBP10.76□□□□□ -0.69
FANCA-220ENST00000566409 RPL11P62913 178 aaKnown RBP10.76□□□□□ -0.69
FANCA-220ENST00000566409 TMEM128Q5BJH2 165 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 LEMD1Q68G75 181 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 OR1S2Q8NGQ3 325 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 NPIPB3Q92617 1050 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 CSTL1Q9H114 145 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 U3KQ87 197 aa10.76□□□□□ -0.69
FANCA-220ENST00000566409 K7EQG2 157 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 ZNF701M0R085 212 aaPredicted RBP10.75□□□□□ -0.69
FANCA-220ENST00000566409 DNASE2O00115 360 aaPredicted RBP10.75□□□□□ -0.69
FANCA-220ENST00000566409 IFNA10P01566 189 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 ANXA3P12429 323 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 S100A5P33763 92 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 P2RY1P47900 373 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 AP3S2P59780 193 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 SRPXP78539 464 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 USF2Q15853 346 aaPredicted RBP10.75□□□□□ -0.69
FANCA-220ENST00000566409 LRTM2Q8N967 370 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 SRRQ9GZT4 340 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 TMEM231Q9H6L2 316 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 CACFD1Q9UGQ2 172 aa10.75□□□□□ -0.69
FANCA-220ENST00000566409 A0A1W2PS18 150 aa10.74□□□□□ -0.69
FANCA-220ENST00000566409 OR1S1Q8NH92 325 aa10.74□□□□□ -0.69
FANCA-220ENST00000566409 DCANP1Q8TF63 244 aa10.74□□□□□ -0.69
FANCA-220ENST00000566409 Q8WTZ3 238 aa10.74□□□□□ -0.69
FANCA-220ENST00000566409 ACY3Q96HD9 319 aa10.74□□□□□ -0.69
FANCA-220ENST00000566409 SLC25A21Q9BQT8 299 aaPredicted RBP10.74□□□□□ -0.69
FANCA-220ENST00000566409 RABAC1Q9UI14 185 aa10.74□□□□□ -0.69
FANCA-220ENST00000566409 EPPK1P58107 5090 aaKnown RBP10.73□□□□□ -0.69
FANCA-220ENST00000566409 IGKV1D-37A0A075B6S9 117 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 DUXBA0A1W2PPF3 345 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 MPTX1A8MV57 137 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 SCGB2A1O75556 95 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 VAMP1P23763 118 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 PPP1R1AQ13522 171 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 BAK1Q16611 211 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 ETFRF1Q6IPR1 90 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 C16orf54Q6UWD8 224 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 NOXA1Q86UR1 476 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 STXBP6Q8NFX7 210 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 GLMPQ8WWB7 406 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 DEDD2Q8WXF8 326 aa10.73□□□□□ -0.69
FANCA-220ENST00000566409 SDHCQ99643 169 aaPredicted RBP10.73□□□□□ -0.69
FANCA-220ENST00000566409 SFT2D2O95562 160 aa10.72□□□□□ -0.69
FANCA-220ENST00000566409 TOMM40O96008 361 aa10.72□□□□□ -0.69
FANCA-220ENST00000566409 IL4P05112 153 aa10.72□□□□□ -0.69
FANCA-220ENST00000566409 HNRNPCP07910 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
FANCA-220ENST00000566409 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
FANCA-220ENST00000566409 PSG1P11464 419 aa10.72□□□□□ -0.69
FANCA-220ENST00000566409 GAMTQ14353 236 aa10.72□□□□□ -0.69
FANCA-220ENST00000566409 BUB3O43684 328 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 IFNA4P05014 189 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 ZNF688P0C7X2 276 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 RD3LP0DJH9 198 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 SLC25A6P12236 298 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 GPX4P36969 197 aaPredicted RBP10.71□□□□□ -0.69
FANCA-220ENST00000566409 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 SPANXN2Q5MJ10 180 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 GRAMD2BQ96HH9 432 aa10.71□□□□□ -0.69
FANCA-220ENST00000566409 KMT2AQ03164 3969 aa10.71□□□□□ -0.7
FANCA-220ENST00000566409 KNCNA6PVL3 124 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
FANCA-220ENST00000566409 IAPPP10997 89 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 ATF4P18848 351 aaPredicted RBP10.7□□□□□ -0.7
FANCA-220ENST00000566409 ATP5IP56385 69 aaPredicted RBP10.7□□□□□ -0.7
FANCA-220ENST00000566409 ZNF90Q03938 601 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
FANCA-220ENST00000566409 CENPSQ8N2Z9 138 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 OR51G1Q8NGK1 321 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 GATAD1Q8WUU5 269 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 NARS2Q96I59 477 aaKnown RBP10.7□□□□□ -0.7
FANCA-220ENST00000566409 RARRES2Q99969 163 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 MAGT1Q9H0U3 335 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms