RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 NPBWR1P48145 328 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 BTN1A1Q13410 526 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 PLGLAQ15195 96 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 FAM120AOSQ5T036 256 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 DYNAPQ8N1N2 210 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 CYB561D1Q8N8Q1 229 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 TMEM160Q9NX00 188 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 FUT9Q9Y231 359 aa13.3□□□□□ -0.28
RAB40C-210ENST00000566290 TENM1Q9UKZ4 2725 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 A0A087WWC5 75 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 TRAV20A0A0B4J274 112 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 A0A1B0GV50 99 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 ZFP92A6NM28 416 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 MSMBP08118 114 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 AREGP15514 252 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 MFAP2P55001 183 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 FGF8P55075 233 aaPredicted RBP13.29□□□□□ -0.28
RAB40C-210ENST00000566290 TAS2R45P59539 299 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 PLP1P60201 277 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
RAB40C-210ENST00000566290 PQLC2Q6ZP29 291 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 SSMEM1Q8WWF3 244 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 NIPSNAP3BQ9BS92 247 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 PKD1L1Q8TDX9 2849 aa13.29□□□□□ -0.28
RAB40C-210ENST00000566290 IGKV1D-37A0A075B6S9 117 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 IGHV1-69DA0A0B4J2H0 117 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 CENPVL3A0A0U1RRI6 287 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 B4DSR2 109 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 FCN1O00602 326 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 PDE6DO43924 150 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 CLN5O75503 358 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 IGHV1-69P01742 117 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 TMEM11P17152 192 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 CD81P60033 236 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 AWAT1Q58HT5 328 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 TMEM68Q96MH6 324 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 MEGF9Q9H1U4 602 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
RAB40C-210ENST00000566290 ELOA3CA0A087WX78 387 aaPredicted RBP13.27□□□□□ -0.29
RAB40C-210ENST00000566290 F6UZH7 168 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 I3L2K1 104 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 BPIFB3P59826 476 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 FXYD3Q14802 87 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 TTC9CQ8N5M4 171 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 OR4X1Q8NH49 305 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 TVP23CQ96ET8 276 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 SMCO4Q9NRQ5 59 aa13.27□□□□□ -0.29
RAB40C-210ENST00000566290 TECRQ9NZ01 308 aaKnown RBP13.27□□□□□ -0.29
RAB40C-210ENST00000566290 H3BQ15 152 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 J3QLI3 93 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 RND2P52198 227 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 HES1Q14469 280 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 Q8N9W7 124 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 ABHD5Q8WTS1 349 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 NPIPB3Q92617 1050 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 HIF1ANQ9NWT6 349 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 PRELID1Q9Y255 219 aa13.26□□□□□ -0.29
RAB40C-210ENST00000566290 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 C7orf77A4D0Y5 90 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 CNIH1O95406 144 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 FABP1P07148 127 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 ARL14EPLP0DKL9 152 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 GCHFRP30047 84 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 GNB1P62873 340 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 CX3CL1P78423 397 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 OR2T6Q8NHC8 308 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 C11orf52Q96A22 123 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 SLC25A33Q9BSK2 321 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 SEPSECSQ9HD40 501 aaKnown RBP13.25□□□□□ -0.29
RAB40C-210ENST00000566290 TMEM242Q9NWH2 141 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
RAB40C-210ENST00000566290 IGLV11-55A0A075B6I3 123 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 A0A1W2PRD5 423 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 A0A1W2PRF3 423 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 A0A1W2PRM7 423 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 CXorf65A6NEN9 183 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 AVPP01185 164 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 C8orf88P0DMB2 117 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 FCGR2BP31994 310 aaPredicted RBP13.24□□□□□ -0.29
RAB40C-210ENST00000566290 CRIP2P52943 208 aaPredicted RBP13.24□□□□□ -0.29
RAB40C-210ENST00000566290 FAM78BQ5VT40 261 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 TCEAL7Q9BRU2 100 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 DNAJC4Q9NNZ3 241 aa13.24□□□□□ -0.29
RAB40C-210ENST00000566290 PAGE4O60829 102 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 REG1AP05451 166 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 HIST1H1BP16401 226 aaKnown RBP13.23□□□□□ -0.29
RAB40C-210ENST00000566290 SRD5A1P18405 259 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 MLANAQ16655 118 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 C17orf50Q8WW18 174 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 ATP6V0BQ99437 205 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms