RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 ZFAND3Q9H8U3 227 aa13.24□□□□□ -0.29
MSLN-206ENST00000566269 PAIP2BQ9ULR5 123 aaKnown RBP13.24□□□□□ -0.29
MSLN-206ENST00000566269 TRAV30A0A087WSZ9 112 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 FAM90A26D6RGX4 464 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 CHEK1O14757 476 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 MED6O75586 246 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 OR10J1P30954 320 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 BMI1P35226 326 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 OR1S2Q8NGQ3 325 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 WWC2-AS2Q96NR7 200 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
MSLN-206ENST00000566269 IGHV3-66A0A0C4DH42 116 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 IFNA21P01568 189 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 HAGHQ16775 308 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 ST8SIA2Q92186 375 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 TM2D3Q9BRN9 247 aa13.22□□□□□ -0.29
MSLN-206ENST00000566269 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 OR4C46A6NHA9 309 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 RAB11AP62491 216 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 NPIPB3Q92617 1050 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 CIB3Q96Q77 187 aaPredicted RBP13.21□□□□□ -0.29
MSLN-206ENST00000566269 METTL26Q96S19 204 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 NUDT15Q9NV35 164 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 UBQLN2Q9UHD9 624 aa13.21□□□□□ -0.29
MSLN-206ENST00000566269 MPTX1A8MV57 137 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 WRBO00258 174 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 SYNGR2O43760 224 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 APOHP02749 345 aaPredicted RBP13.2□□□□□ -0.3
MSLN-206ENST00000566269 TCRBP04435 133 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 TFPI2P48307 235 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 ATP5IP56385 69 aaPredicted RBP13.2□□□□□ -0.3
MSLN-206ENST00000566269 SLC35E1Q96K37 410 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 SPATA25Q9BR10 227 aa13.2□□□□□ -0.3
MSLN-206ENST00000566269 WDR12Q9GZL7 423 aaKnown RBP13.2□□□□□ -0.3
MSLN-206ENST00000566269 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
MSLN-206ENST00000566269 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
MSLN-206ENST00000566269 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
MSLN-206ENST00000566269 NPPCP23582 126 aa13.19□□□□□ -0.3
MSLN-206ENST00000566269 TCF24Q7RTU0 167 aa13.19□□□□□ -0.3
MSLN-206ENST00000566269 Q8WTZ3 238 aa13.19□□□□□ -0.3
MSLN-206ENST00000566269 NARS2Q96I59 477 aaKnown RBP13.19□□□□□ -0.3
MSLN-206ENST00000566269 TMEM231Q9H6L2 316 aa13.19□□□□□ -0.3
MSLN-206ENST00000566269 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 H3BP45 60 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 YPEL3P61236 119 aaPredicted RBP13.18□□□□□ -0.3
MSLN-206ENST00000566269 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
MSLN-206ENST00000566269 RPP30P78346 268 aaKnown RBP13.18□□□□□ -0.3
MSLN-206ENST00000566269 ZNF846Q147U1 533 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 MZT2BQ6NZ67 158 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 GBGT1Q8N5D6 347 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
MSLN-206ENST00000566269 A0A1W2PS18 150 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 SSSCA1O60232 199 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 DFFBO76075 338 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 SCGB1D2O95969 90 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 IL4P05112 153 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 CD5P06127 495 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
MSLN-206ENST00000566269 NKX2-1P43699 371 aaPredicted RBP13.17□□□□□ -0.3
MSLN-206ENST00000566269 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
MSLN-206ENST00000566269 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
MSLN-206ENST00000566269 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 LINC00322Q6ZN03 302 aaPredicted RBP13.17□□□□□ -0.3
MSLN-206ENST00000566269 RETNQ9HD89 108 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 BATF3Q9NR55 127 aa13.17□□□□□ -0.3
MSLN-206ENST00000566269 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 TOMM40O96008 361 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 RD3LP0DJH9 198 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 CRYBB3P26998 211 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 PAFAH1B2P68402 229 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 ASAH1Q13510 395 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 GAMTQ14353 236 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 LILRB2Q8N423 598 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 CITED4Q96RK1 184 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
MSLN-206ENST00000566269 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
MSLN-206ENST00000566269 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
MSLN-206ENST00000566269 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
MSLN-206ENST00000566269 CCSO14618 274 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 UPK1BO75841 260 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 HNRNPCP07910 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
MSLN-206ENST00000566269 P2RY1P47900 373 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 ID3Q02535 119 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 GRAMD2BQ96HH9 432 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 GSKIPQ9P0R6 139 aa13.15□□□□□ -0.3
MSLN-206ENST00000566269 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
MSLN-206ENST00000566269 PSG1P11464 419 aa13.14□□□□□ -0.31
MSLN-206ENST00000566269 USF2Q15853 346 aaPredicted RBP13.14□□□□□ -0.31
MSLN-206ENST00000566269 ZBTB8BQ8NAP8 495 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms