RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ELLP55199 621 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-214ENST00000566230 PRR20EP86478 221 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 PRR20CP86479 221 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 PRR20DP86480 221 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 PRR20BP86481 221 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 PRR20AP86496 221 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 DHRS2Q13268 280 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 C4orf46Q504U0 113 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 UBQLN2Q9UHD9 624 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 OR2T8A6NH00 312 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 MED6O75586 246 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 IFNA21P01568 189 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 CTSGP08311 255 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 HOXB5P09067 269 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 ANXA7P20073 488 aaKnown RBP9.88□□□□□ -0.83
COMMD4-214ENST00000566230 NPBWR1P48145 328 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 ASAH1Q13510 395 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 Q56UQ5 140 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
COMMD4-214ENST00000566230 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
COMMD4-214ENST00000566230 GATAD1Q8WUU5 269 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 MARC2Q969Z3 335 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 PINX1Q96BK5 328 aaKnown RBP9.88□□□□□ -0.83
COMMD4-214ENST00000566230 ZNF436Q9C0F3 470 aaPredicted RBP9.88□□□□□ -0.83
COMMD4-214ENST00000566230 C20orf85Q9H1P6 137 aa9.88□□□□□ -0.83
COMMD4-214ENST00000566230 IGHV3-21A0A0B4J1V1 117 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
COMMD4-214ENST00000566230 NDUFA4O00483 81 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 NUPL2O15504 423 aaKnown RBP9.87□□□□□ -0.83
COMMD4-214ENST00000566230 RELQ04864 619 aaPredicted RBP9.87□□□□□ -0.83
COMMD4-214ENST00000566230 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 GGNBP1Q5YKI7 109 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 STPG3Q8N7X2 389 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 UBAC2Q8NBM4 344 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 DTD1Q8TEA8 209 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 MITD1Q8WV92 249 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 RBKSQ9H477 322 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 MRPL27Q9P0M9 148 aaKnown RBP9.87□□□□□ -0.83
COMMD4-214ENST00000566230 UFC1Q9Y3C8 167 aa9.87□□□□□ -0.83
COMMD4-214ENST00000566230 TRAV6A0A075B6T7 132 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 RPS10-NUDT3A0A1W2PQS6 291 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 K7EMT4 169 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 GNG7O60262 68 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 TMEM50AO95807 157 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 IFNA10P01566 189 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 H2AFB2P0C5Z0 115 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 ADMP35318 185 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 TMEM217Q8N7C4 229 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 SLC24A4Q8NFF2 622 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 MUC4Q99102 2169 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 SPAG8Q99932 426 aaPredicted RBP9.86□□□□□ -0.83
COMMD4-214ENST00000566230 CHRDL1Q9BU40 450 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 NUDT15Q9NV35 164 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 TBC1D24Q9ULP9 559 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
COMMD4-214ENST00000566230 TSPAN4O14817 238 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 SCGB2A1O75556 95 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 SLC25A4P12235 298 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
COMMD4-214ENST00000566230 OPRK1P41145 380 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 RPP30P78346 268 aaKnown RBP9.85□□□□□ -0.83
COMMD4-214ENST00000566230 ID3Q02535 119 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 MLANAQ16655 118 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 CIB3Q96Q77 187 aaPredicted RBP9.85□□□□□ -0.83
COMMD4-214ENST00000566230 MAP6D1Q9H9H5 199 aa9.85□□□□□ -0.83
COMMD4-214ENST00000566230 C15orf62A8K5M9 175 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 SYNGR2O43760 224 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 CLN5O75503 358 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 ADAP1O75689 374 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 NXPH3O95157 252 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 NPY1RP25929 384 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 GPX4P36969 197 aaPredicted RBP9.84□□□□□ -0.83
COMMD4-214ENST00000566230 DEFA1P59665 94 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 DEFA3P59666 94 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 NANOS2P60321 138 aaKnown RBP9.84□□□□□ -0.83
COMMD4-214ENST00000566230 RAB11AP62491 216 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 IFITM3Q01628 133 aa9.84□□□□□ -0.83
COMMD4-214ENST00000566230 ZNF431Q8TF32 576 aaPredicted RBP9.84□□□□□ -0.83
COMMD4-214ENST00000566230 FNDC4Q9H6D8 234 aaPredicted RBP9.84□□□□□ -0.83
COMMD4-214ENST00000566230 IGHV3-48P01763 117 aa9.83□□□□□ -0.84
COMMD4-214ENST00000566230 IL5P05113 134 aa9.83□□□□□ -0.84
COMMD4-214ENST00000566230 TMEM116Q8NCL8 245 aa9.83□□□□□ -0.84
COMMD4-214ENST00000566230 ENKURQ8TC29 256 aa9.83□□□□□ -0.84
COMMD4-214ENST00000566230 TMEM190Q8WZ59 177 aa9.83□□□□□ -0.84
COMMD4-214ENST00000566230 DAZ1Q9NQZ3 744 aaKnown RBP9.83□□□□□ -0.84
COMMD4-214ENST00000566230 FAT2Q9NYQ8 4349 aa9.83□□□□□ -0.84
COMMD4-214ENST00000566230 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
COMMD4-214ENST00000566230 IFNA4P05014 189 aa9.82□□□□□ -0.84
COMMD4-214ENST00000566230 NKX2-1P43699 371 aaPredicted RBP9.82□□□□□ -0.84
COMMD4-214ENST00000566230 PRSS54Q6PEW0 395 aa9.82□□□□□ -0.84
COMMD4-214ENST00000566230 ZNF600Q6ZNG1 722 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms