RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 NARS2Q96I59 477 aaKnown RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 RARRES2Q99969 163 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 SLIRPQ9GZT3 109 aaKnown RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 SHPKQ9UHJ6 478 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 CXorf65A6NEN9 183 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 HELTA6NFD8 242 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 EIF2B2P49770 351 aaKnown RBP11.11□□□□□ -0.63
CMTM3-212ENST00000566121 CCR6P51684 374 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 SRPXP78539 464 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 IL18Q14116 193 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 CLVS1Q8IUQ0 354 aaPredicted RBP11.11□□□□□ -0.63
CMTM3-212ENST00000566121 OR51S1Q8NGJ8 323 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 RNASE11Q8TAA1 199 aaKnown RBP11.11□□□□□ -0.63
CMTM3-212ENST00000566121 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 TMEM230Q96A57 120 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 HRH4Q9H3N8 390 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 HSPB7Q9UBY9 170 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 CACNG5Q9UF02 275 aa11.11□□□□□ -0.63
CMTM3-212ENST00000566121 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 SULT1A3P0DMM9 295 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 SULT1A4P0DMN0 295 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 P2RY1P47900 373 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 MLANAQ16655 118 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
CMTM3-212ENST00000566121 GBGT1Q8N5D6 347 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 TMEM170AQ8WVE7 144 aa11.1□□□□□ -0.63
CMTM3-212ENST00000566121 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 SPP1P10451 314 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
CMTM3-212ENST00000566121 TFPI2P48307 235 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 DEFB131AP59861 70 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 ZNF124Q15973 351 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 FAAP20Q6NZ36 180 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 C16orf54Q6UWD8 224 aa11.09□□□□□ -0.63
CMTM3-212ENST00000566121 TRPT1Q86TN4 253 aaKnown RBP11.09□□□□□ -0.63
CMTM3-212ENST00000566121 FABP12A6NFH5 140 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 HNRNPCP07910 306 aaKnown RBP eCLIP11.08□□□□□ -0.64
CMTM3-212ENST00000566121 GIG44P09565 113 aaPredicted RBP11.08□□□□□ -0.64
CMTM3-212ENST00000566121 SLC25A6P12236 298 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 ANXA3P12429 323 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 NPY1RP25929 384 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 OR10J1P30954 320 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 TNFSF8P32971 234 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
CMTM3-212ENST00000566121 SUPT4H1P63272 117 aaKnown RBP11.08□□□□□ -0.64
CMTM3-212ENST00000566121 TIGITQ495A1 244 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 STHQ8IWL8 128 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 OR11H2Q8NH07 326 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
CMTM3-212ENST00000566121 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
CMTM3-212ENST00000566121 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 CEBPZOSA8MTT3 80 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 ZNF705EA8MWA4 302 aaPredicted RBP11.07□□□□□ -0.64
CMTM3-212ENST00000566121 BUB3O43684 328 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 TOMM40O96008 361 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 RND2P52198 227 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 RPL11P62913 178 aaKnown RBP11.07□□□□□ -0.64
CMTM3-212ENST00000566121 SMCO1Q147U7 214 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 LGI3Q8N145 548 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 FAM24BQ8N5W8 94 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 PFDN2Q9UHV9 154 aa11.07□□□□□ -0.64
CMTM3-212ENST00000566121 FAM90A26D6RGX4 464 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 H3BMQ9 156 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 PITX3O75364 302 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
CMTM3-212ENST00000566121 RD3LP0DJH9 198 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 FAUP35544 74 aaKnown RBP11.06□□□□□ -0.64
CMTM3-212ENST00000566121 AP3S2P59780 193 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 PMS2P11Q13670 270 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 RBMS2Q15434 407 aaKnown RBP11.06□□□□□ -0.64
CMTM3-212ENST00000566121 TMEM128Q5BJH2 165 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 C11orf45Q8TAV5 145 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 SLC25A21Q9BQT8 299 aaPredicted RBP11.06□□□□□ -0.64
CMTM3-212ENST00000566121 RABAC1Q9UI14 185 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 DNAH17Q9UFH2 4485 aa11.06□□□□□ -0.64
CMTM3-212ENST00000566121 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 C11orf94C9JXX5 98 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 NXPH3O95157 252 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 IFNA4P05014 189 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 MIFP14174 115 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 KLF9Q13886 244 aaPredicted RBP11.05□□□□□ -0.64
CMTM3-212ENST00000566121 OR8G2PQ6IF36 304 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 Q8NAQ8 132 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 CSNK1G2-AS1Q8NCQ2 148 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 DTD1Q8TEA8 209 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 NPIPB3Q92617 1050 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 CLUHP3Q96NS8 147 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 HECTD4Q9Y4D8 3996 aa11.05□□□□□ -0.64
CMTM3-212ENST00000566121 DNAH2Q9P225 4427 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 AGRNO00468 2067 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 USF2Q15853 346 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms