RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 IGHV3-73A0A0B4J1V6 119 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 TMEM86BQ8N661 226 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 A0A087WWC5 75 aa11.27□□□□□ -0.6
CX3CL1-204ENST00000565912 IGKV1-9A0A0C4DH69 117 aa11.27□□□□□ -0.6
CX3CL1-204ENST00000565912 DUTP33316 252 aaKnown RBP11.27□□□□□ -0.6
CX3CL1-204ENST00000565912 ORMDL2Q53FV1 153 aa11.27□□□□□ -0.6
CX3CL1-204ENST00000565912 VMO1Q7Z5L0 202 aa11.27□□□□□ -0.6
CX3CL1-204ENST00000565912 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.6
CX3CL1-204ENST00000565912 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 MLNRO43193 412 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 PCP4P48539 62 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 TRAV5A0A0B4J249 113 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 RIPPLY3P57055 190 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 SLC25A28Q96A46 364 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 C5orf30Q96GV9 206 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 PRADC1Q9BSG0 188 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 CST9LQ9H4G1 147 aa11.27□□□□□ -0.61
CX3CL1-204ENST00000565912 HEATR5BQ9P2D3 2071 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 PLNP26678 52 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 CKS1BP61024 79 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 RPL15P61313 204 aaKnown RBP11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 KLRD1Q13241 179 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 EFNB3Q15768 340 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 DERL1Q9BUN8 251 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 DSCR9P59020 149 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 SSC4DQ8WTU2 575 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 CLDN16Q9Y5I7 305 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 SCN2AQ99250 2005 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 A0A087WV48 116 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 RCHY1Q96PM5 261 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 MESP1Q9BRJ9 268 aa11.26□□□□□ -0.61
CX3CL1-204ENST00000565912 PIKFYVEQ9Y2I7 2098 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 PTPRFP10586 1907 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 IGKV2-40A0A087WW87 121 aaPredicted RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 IGHV2-26A0A0B4J1V2 119 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 A0A1B0GV72 72 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 NAPSAO96009 420 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 IGKV2D-40P01614 121 aaPredicted RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 RNF126Q9BV68 326 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 HOXA3O43365 443 aaPredicted RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 ZFP36L1Q07352 338 aaKnown RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 RALGAPA2Q2PPJ7 1873 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 PPBPP02775 128 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 EFNA4P52798 201 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 ASCL4Q6XD76 172 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 JPT2Q9H910 190 aa11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 TBX6O95947 436 aaPredicted RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
CX3CL1-204ENST00000565912 GGTLC3B5MD39 225 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 NPC2P61916 151 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 ZNF319Q9P2F9 582 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 IGKCP01834 107 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 SELLP14151 372 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 TNFRSF14Q92956 283 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 RTTNQ86VV8 2226 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 A0A0G2JMZ2 1700 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 GNLYP22749 145 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 SRSF7Q16629 238 aaKnown RBP eCLIP11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 BRD3OSQ6XYD6 125 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 CACNA1IQ9P0X4 2223 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 F2Z2F3 143 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 OTOFQ9HC10 1997 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 GZMBP10144 247 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 FXYD7P58549 80 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 TMEM170AQ8WVE7 144 aa11.24□□□□□ -0.61
CX3CL1-204ENST00000565912 PATJQ8NI35 1801 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 LCTP09848 1927 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 CD59P13987 128 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 FOXG1P55316 489 aaPredicted RBP11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 FOXL1Q12952 345 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 PSCAO43653 123 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 SRSF6Q13247 344 aaKnown RBP11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 ESPL1Q14674 2120 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 CCL1P22362 96 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 TMEM200BQ69YZ2 307 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
CX3CL1-204ENST00000565912 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 H3BUX3 64 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 ZNF876PQ49A33 203 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 FAM166AQ6J272 317 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms