RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 AKIRIN2Q53H80 203 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 Q5PR19 223 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 SLC16A13Q7RTY0 426 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 TMEM144Q7Z5S9 345 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 KRTAP1-3Q8IUG1 177 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 CCDC28AQ8IWP9 274 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 MBD3L1Q8WWY6 194 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 Q96MF0 132 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 C20orf24Q9BUV8 137 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 DOK5Q9P104 306 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 SLC45A2Q9UMX9 530 aa4.91□□□□□ -1.62
CHD9-217ENST00000565832 TBL2Q9Y4P3 447 aaKnown RBP4.91□□□□□ -1.62
CHD9-217ENST00000565832 IGHV7-81A0A0B4J1V7 117 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 G3V318 75 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 MT-CO2P00403 227 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 IGHV3-23P01764 117 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 AMY1AP04745 511 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 AKR1C3P42330 323 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 SUB1P53999 127 aaKnown RBP eCLIP4.9□□□□□ -1.62
CHD9-217ENST00000565832 KIAA0141Q14154 515 aaPredicted RBP4.9□□□□□ -1.62
CHD9-217ENST00000565832 ZNF562Q6V9R5 426 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 WFDC11Q8NEX6 87 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 TMEM37Q8WXS4 190 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 UHRF2Q96PU4 802 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 SSX3Q99909 188 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 TNFRSF19Q9NS68 423 aa4.9□□□□□ -1.62
CHD9-217ENST00000565832 TRAV1-1A0A0B4J248 108 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 TRAV5A0A0B4J249 113 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 A0A1W2PPV4 95 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 OOSP1A8MZH6 123 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 CYB5BO43169 146 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 MPDU1O75352 247 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 HSPB1P04792 205 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 CTRB1P17538 263 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 BRS3P32247 399 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 MAS1LP35410 378 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 GPX4P36969 197 aaPredicted RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 NPBWR1P48145 328 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 DSCR9P59020 149 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 UBE2G2P60604 165 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 PEA15Q15121 130 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 ACOT6Q3I5F7 207 aaPredicted RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 C10orf91Q5T1B1 145 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 CTRB2Q6GPI1 263 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 TMEM88Q6PEY1 159 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 DPPA3Q6W0C5 159 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 CYB561D1Q8N8Q1 229 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 OR1P1Q8NH06 330 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 ACTR3CQ9C0K3 210 aaPredicted RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 F11RQ9Y624 299 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 SETXQ7Z333 2677 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 CTXND1A0A1B0GTU2 59 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 FAM74A7A6NL05 159 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 H3BUX3 64 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 PAGE4O60829 102 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 MBP02144 154 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 SRP19P09132 144 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 ARL14EPLP0DKL9 152 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 IGHV4-31P0DP07 118 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 SLC25A16P16260 332 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 RPL29P47914 159 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 BLCAPP62952 87 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 RAB31Q13636 194 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 FAM74A3Q4VXF1 159 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 FAM78BQ5VT40 261 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 PATE2Q6UY27 113 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 MIR17HGQ75NE6 70 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 LINC01356Q8N9X3 169 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 RNASEH2CQ8TDP1 164 aaKnown RBP4.89□□□□□ -1.63
CHD9-217ENST00000565832 CACNG8Q8WXS5 425 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 ARPC1AQ92747 370 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 SEC11CQ9BY50 192 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 SLC35B3Q9H1N7 401 aa4.89□□□□□ -1.63
CHD9-217ENST00000565832 I3L2K1 104 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 K7EIM0 57 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 CRYGCP07315 174 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 OR10J4P0C629 311 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ATP5IP56385 69 aaPredicted RBP4.88□□□□□ -1.63
CHD9-217ENST00000565832 CD81P60033 236 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 TMEM249Q2WGJ8 235 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 PVRIGQ6DKI7 326 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 SLC35E3Q7Z769 313 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 COMMD1Q8N668 190 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 OR51G1Q8NGK1 321 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 SLC35E1Q96K37 410 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 RASL11BQ9BPW5 248 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 PBDC1Q9BVG4 233 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 PUS1Q9Y606 427 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD9-217ENST00000565832 IGHV3-35A0A0C4DH35 117 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 LOC102723971A0A1B0GUV8 181 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 PSMB11A5LHX3 300 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 SEC14L6B5MCN3 397 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ATP6V0E1O15342 81 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 OR2J3O76001 311 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 NDUFB8O95169 186 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 HBE1P02100 147 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms