RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 HTR2BP41595 481 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 IL18Q14116 193 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 SURF2Q15527 256 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-209ENST00000565511 C2orf83Q53S99 150 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 DCANP1Q8TF63 244 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 DIRAS2Q96HU8 199 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 TMEM231Q9H6L2 316 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 HEYLQ9NQ87 328 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-209ENST00000565511 TMEM56-RWDD3S4R434 201 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 DEDDO75618 318 aa17.29■□□□□ 0.36
RAB40C-209ENST00000565511 DHODHQ02127 395 aa17.29■□□□□ 0.36
RAB40C-209ENST00000565511 TMEM187Q14656 261 aa17.29■□□□□ 0.36
RAB40C-209ENST00000565511 TRPT1Q86TN4 253 aaKnown RBP17.29■□□□□ 0.36
RAB40C-209ENST00000565511 SLC24A4Q8NFF2 622 aa17.29■□□□□ 0.36
RAB40C-209ENST00000565511 CCDC59Q9P031 241 aaKnown RBP17.29■□□□□ 0.36
RAB40C-209ENST00000565511 FBXL17Q9UF56 701 aa17.29■□□□□ 0.36
RAB40C-209ENST00000565511 ANKRD20A5PA0PJZ0 165 aa17.28■□□□□ 0.36
RAB40C-209ENST00000565511 CEBPZOSA8MTT3 80 aa17.28■□□□□ 0.36
RAB40C-209ENST00000565511 USF2Q15853 346 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-209ENST00000565511 Q8NAQ8 132 aa17.28■□□□□ 0.36
RAB40C-209ENST00000565511 GLMPQ8WWB7 406 aa17.28■□□□□ 0.36
RAB40C-209ENST00000565511 A0A1W2PS18 150 aa17.27■□□□□ 0.36
RAB40C-209ENST00000565511 STHQ8IWL8 128 aa17.27■□□□□ 0.36
RAB40C-209ENST00000565511 OR1S2Q8NGQ3 325 aa17.27■□□□□ 0.36
RAB40C-209ENST00000565511 C11orf45Q8TAV5 145 aa17.27■□□□□ 0.36
RAB40C-209ENST00000565511 RPS10-NUDT3A0A1W2PQS6 291 aa17.26■□□□□ 0.35
RAB40C-209ENST00000565511 GSTZ1O43708 216 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-209ENST00000565511 OR10J1P30954 320 aa17.26■□□□□ 0.35
RAB40C-209ENST00000565511 SUPT4H1P63272 117 aaKnown RBP17.26■□□□□ 0.35
RAB40C-209ENST00000565511 GRAMD2BQ96HH9 432 aa17.26■□□□□ 0.35
RAB40C-209ENST00000565511 TRAV30A0A087WSZ9 112 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 RBMY1A1P0DJD3 496 aaKnown RBP17.25■□□□□ 0.35
RAB40C-209ENST00000565511 RBMY1CP0DJD4 496 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 NPY1RP25929 384 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 RBMY1FQ15415 496 aaKnown RBP17.25■□□□□ 0.35
RAB40C-209ENST00000565511 NMSQ5H8A3 153 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 C16orf54Q6UWD8 224 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 RNASEH2CQ8TDP1 164 aaKnown RBP17.25■□□□□ 0.35
RAB40C-209ENST00000565511 RAB2BQ8WUD1 216 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 NPIPB3Q92617 1050 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 PRRT1Q99946 306 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 SOSTQ9BQB4 213 aa17.25■□□□□ 0.35
RAB40C-209ENST00000565511 SLIRPQ9GZT3 109 aaKnown RBP17.25■□□□□ 0.35
RAB40C-209ENST00000565511 YPEL3P61236 119 aaPredicted RBP17.24■□□□□ 0.35
RAB40C-209ENST00000565511 IGHV4-28A0A0C4DH34 117 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAB40C-209ENST00000565511 SULT1A3P0DMM9 295 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 SULT1A4P0DMN0 295 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 SLC25A4P12235 298 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 DHRS2Q13268 280 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 ACTL10Q5JWF8 245 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 LYZL2Q7Z4W2 148 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 IL22RA2Q969J5 263 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 ACY3Q96HD9 319 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 CLEC5AQ9NY25 188 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 X6R8D5 127 aa17.23■□□□□ 0.35
RAB40C-209ENST00000565511 H3BMQ9 156 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 IL4P05112 153 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 PRR20EP86478 221 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 PRR20CP86479 221 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 PRR20DP86480 221 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 PRR20BP86481 221 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 PRR20AP86496 221 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 Q8WTZ3 238 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 RBKSQ9H477 322 aa17.22■□□□□ 0.35
RAB40C-209ENST00000565511 SCGB2A1O75556 95 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 TNFSF8P32971 234 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 TMBIM6P55061 237 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 PSMG4Q5JS54 123 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 LGALS9CQ6DKI2 356 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 CSNK1G2-AS1Q8NCQ2 148 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 NARS2Q96I59 477 aaKnown RBP17.21■□□□□ 0.35
RAB40C-209ENST00000565511 MFFQ9GZY8 342 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 HSPB7Q9UBY9 170 aa17.21■□□□□ 0.35
RAB40C-209ENST00000565511 TOMM40O96008 361 aa17.2■□□□□ 0.34
RAB40C-209ENST00000565511 AKR1C4P17516 323 aa17.2■□□□□ 0.34
RAB40C-209ENST00000565511 GSG1LQ6UXU4 331 aa17.2■□□□□ 0.34
RAB40C-209ENST00000565511 MCUBQ9NWR8 336 aa17.2■□□□□ 0.34
RAB40C-209ENST00000565511 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-209ENST00000565511 ZNF705EA8MWA4 302 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-209ENST00000565511 FAM90A26D6RGX4 464 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 SPP1P10451 314 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 PSG1P11464 419 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 SMCO1Q147U7 214 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 DTD1Q8TEA8 209 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 RAB40CQ96S21 281 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 BCL7BQ9BQE9 202 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 RABL2AQ9UBK7 228 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-209ENST00000565511 RSL24D1Q9UHA3 163 aaKnown RBP17.19■□□□□ 0.34
RAB40C-209ENST00000565511 SCP2D1Q9UJQ7 156 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 RABL2BQ9UNT1 228 aa17.19■□□□□ 0.34
RAB40C-209ENST00000565511 IGKV1D-37A0A075B6S9 117 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 A0A0B4J2A0 478 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 HELTA6NFD8 242 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 BUB3O43684 328 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 IFNA10P01566 189 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 CCR6P51684 374 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 DEFB1P60022 68 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 MORN3Q6PF18 240 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-209ENST00000565511 OR51G1Q8NGK1 321 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms