RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 A0A1B0GUL6 1792 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 SCN11AQ9UI33 1791 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 ARFGEF2Q9Y6D5 1785 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 RREB1Q92766 1687 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 BTAF1O14981 1849 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 FABP5P3A8MUU1 101 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 IBA57-AS1B1ANH7 110 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 M0R036 132 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 RPSAP08865 295 aaKnown RBP1.39□□□□□ -2.19
CHD9-215ENST00000565442 LYNX1P0DP58 116 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 RPS4Y1P22090 263 aaKnown RBP1.39□□□□□ -2.19
CHD9-215ENST00000565442 CCL20P78556 96 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 ELOBQ15370 118 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 KISS1Q15726 138 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 Q6ZS49 121 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 SMIM5Q71RC9 77 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 C1orf158Q8N1D5 194 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 PARVGQ9HBI0 331 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 PKIGQ9Y2B9 76 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 OVOS2A0A0J9YW53 1432 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 OVOS2Q6IE36 1432 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 LAMB2P55268 1798 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 UBR2Q8IWV8 1755 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 SCN7AQ01118 1682 aa1.39□□□□□ -2.19
CHD9-215ENST00000565442 C1orf167Q5SNV9 1468 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 COL24A1Q17RW2 1714 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 PCDH15Q96QU1 1955 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 IRGMA1A4Y4 181 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 TRAPPC13A5PLN9 417 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 F8W036 122 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 PSMD12O00232 456 aaPredicted RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 SDCBPO00560 298 aaPredicted RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 IFNA16P05015 189 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 UBBP0CG47 229 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 NFYAP23511 347 aaPredicted RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 ITGB3BPQ13352 177 aaPredicted RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 NDUFA5Q16718 116 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 IBA57Q5T440 356 aaKnown RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 AADACL3Q5VUY0 350 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 SYPL2Q5VXT5 272 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 DHFR2Q86XF0 187 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 MRPL30Q8TCC3 161 aaKnown RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 IMP4Q96G21 291 aaKnown RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 PPP1R2P1Q96PQ5 205 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 BAIAP2Q9UQB8 552 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 HELZ2Q9BYK8 2649 aaKnown RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 COL14A1Q05707 1796 aaKnown RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 ANKRD36CQ5JPF3 1778 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 BCORQ6W2J9 1755 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 N4BP2Q86UW6 1770 aaPredicted RBP1.38□□□□□ -2.19
CHD9-215ENST00000565442 TECPR2O15040 1411 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 NHSQ6T4R5 1651 aa1.38□□□□□ -2.19
CHD9-215ENST00000565442 DDX60Q8IY21 1712 aaKnown RBP1.37□□□□□ -2.19
CHD9-215ENST00000565442 CCDC88AQ3V6T2 1871 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 BRWD1Q9NSI6 2320 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 IGKV1D-43A0A0B4J1Z2 117 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 CD79AP11912 226 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BOP23527 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BBP33778 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 SULT1A1P50225 295 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 FXYD2P54710 66 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BDP58876 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BCP62807 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST2H2BEQ16778 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 IMPG1Q17R60 797 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BHQ93079 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BNQ99877 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 HIST1H2BMQ99879 126 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 DERL1Q9BUN8 251 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 TP73-AS1Q9UF72 201 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 ECM29Q5VYK3 1845 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 TAF1LQ8IZX4 1826 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 TNS3Q68CZ2 1445 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 LY75O60449 1722 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 KIAA1551Q9HCM1 1747 aa1.37□□□□□ -2.19
CHD9-215ENST00000565442 KTN1Q86UP2 1357 aaKnown RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 SMIM23A6NLE4 172 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 KDM6AO15550 1401 aaPredicted RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 LYPLA2O95372 231 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 HLA-DRB1P01911 266 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 PMP2P02689 132 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 ANGP03950 147 aaKnown RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 SNRPD2P62316 118 aaKnown RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 UBE2IP63279 158 aaKnown RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 HBA1P69905 142 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 CPSF1Q10570 1443 aaKnown RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 ZNF345Q14585 488 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 CDK5R1Q15078 307 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 KCNJ8Q15842 424 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 FAM135BQ49AJ0 1406 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 RPS19BP1Q86WX3 136 aaKnown RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 ANKRD31Q8N7Z5 1873 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 ZNF439Q8NDP4 499 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 MNS1Q8NEH6 495 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 OR52E6Q96RD3 313 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 LHFPL6Q9Y693 200 aa1.36□□□□□ -2.19
CHD9-215ENST00000565442 CDK12Q9NYV4 1490 aaPredicted RBP1.36□□□□□ -2.19
CHD9-215ENST00000565442 KCPQ6ZWJ8 1503 aa1.35□□□□□ -2.19
CHD9-215ENST00000565442 ANKRD36BQ8N2N9 1353 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms