RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
SMG1-211ENST00000565324 SPEM2Q0P670 501 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 PRADC1Q9BSG0 188 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 C2CD4DB7Z1M9 353 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 PRTN3P24158 256 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 UBL5Q9BZL1 73 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 DPM3Q9P2X0 92 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 FBXL7Q9UJT9 491 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 IGHV1OR15-9A0A0B4J2B8 117 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 SOCS3O14543 225 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 PAX4O43316 350 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 CFHR5Q9BXR6 569 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 PLAC1Q9HBJ0 212 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 RNF222A6NCQ9 220 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 C15orf61A6NNL5 157 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 ATP6V0BQ99437 205 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 IGFBP2P18065 325 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 C3AR1Q16581 482 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 ZAR1Q86SH2 424 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 STHQ8IWL8 128 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 SHANK3Q9BYB0 1731 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 A0A1B0GTI1 187 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 SYS1-DBNDD2H3BUS1 97 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 ACP7Q6ZNF0 438 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 MRAPQ8TCY5 172 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 A0A0J9YW62 118 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 TRGV3P03979 118 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 TFF3Q07654 80 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 GUSBP1Q15486 140 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 PRR7Q8TB68 274 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 ITLN2Q8WWU7 325 aaPredicted RBP4.28□□□□□ -1.72
SMG1-211ENST00000565324 RNF126Q9BV68 326 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 CCL21O00585 134 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 TPRX1Q8N7U7 411 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 FGF11Q92914 225 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 C1orf162Q8NEQ5 155 aaPredicted RBP4.28□□□□□ -1.72
SMG1-211ENST00000565324 FOXA2Q9Y261 457 aaPredicted RBP4.28□□□□□ -1.72
SMG1-211ENST00000565324 HCFC1P51610 2035 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 C9JAW5 83 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 WISP3O95389 354 aaPredicted RBP4.28□□□□□ -1.72
SMG1-211ENST00000565324 LYPD1Q8N2G4 141 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 ZNF784Q8NCA9 323 aaPredicted RBP4.28□□□□□ -1.72
SMG1-211ENST00000565324 NLRC5Q86WI3 1866 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 IGFBP3P17936 291 aaPredicted RBP4.28□□□□□ -1.72
SMG1-211ENST00000565324 GLRXP35754 106 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 LINC00158P58513 81 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 LINC01587Q99440 93 aa4.28□□□□□ -1.72
SMG1-211ENST00000565324 SMAD7O15105 426 aaKnown RBP4.28□□□□□ -1.73
SMG1-211ENST00000565324 ACYP1P07311 99 aa4.28□□□□□ -1.73
SMG1-211ENST00000565324 FOXC1Q12948 553 aa4.28□□□□□ -1.73
SMG1-211ENST00000565324 DEFB123Q8N688 67 aa4.28□□□□□ -1.73
SMG1-211ENST00000565324 FBLN5Q9UBX5 448 aa4.28□□□□□ -1.73
SMG1-211ENST00000565324 MGAMO43451 1857 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 OBSL1O75147 1896 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 HOXB3P14651 431 aaPredicted RBP4.27□□□□□ -1.73
SMG1-211ENST00000565324 COL24A1Q17RW2 1714 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 C16orf47Q6ZP98 133 aaPredicted RBP4.27□□□□□ -1.73
SMG1-211ENST00000565324 ADAMTSL1Q8N6G6 1762 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 GLI3P10071 1580 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 Q5BKY6 102 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 ZNF362Q5T0B9 420 aaPredicted RBP4.27□□□□□ -1.73
SMG1-211ENST00000565324 ZPLD1Q8TCW7 415 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 DUSP15Q9H1R2 295 aaPredicted RBP4.27□□□□□ -1.73
SMG1-211ENST00000565324 VCYO14598 125 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 IGKV1D-16P01601 117 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 SRSF7Q16629 238 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMG1-211ENST00000565324 WFDC6Q9BQY6 131 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 ZIC3O60481 467 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 CCL19Q99731 98 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 COL6A6A6NMZ7 2263 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 LINC00271P0C7V0 271 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 COX6B1P14854 86 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 C8orf46Q8TAG6 207 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 GFRA4Q9GZZ7 299 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 HRKO00198 91 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 YPEL1O60688 119 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 IL18BPO95998 194 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 LILRA6Q6PI73 481 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 YPEL2Q96QA6 119 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 A0A0G2JMZ2 1700 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 LRRC37A2A6NM11 1700 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 LRRC37AA6NMS7 1700 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 FNDC10F2Z333 226 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 CEACAM1P13688 526 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 MPV17L2Q567V2 206 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 GTSCR1Q86UQ5 136 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 H3BTX0 84 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 TCTEX1D4Q5JR98 221 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 TRAV8-3A0A0A6YYJ7 113 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 ERCC8Q13216 396 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 PEAR1Q5VY43 1037 aaPredicted RBP4.27□□□□□ -1.73
SMG1-211ENST00000565324 C18orf12Q96KH6 178 aa4.27□□□□□ -1.73
SMG1-211ENST00000565324 RTBDNQ9BSG5 229 aaPredicted RBP4.27□□□□□ -1.73
SMG1-211ENST00000565324 MSGN1A6NI15 193 aa4.26□□□□□ -1.73
SMG1-211ENST00000565324 NBR2O15453 112 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 558.6 ms