RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 MARCH1Q8TCQ1 289 aa11.43□□□□□ -0.58
CDH11-210ENST00000564770 NARS2Q96I59 477 aaKnown RBP11.43□□□□□ -0.58
CDH11-210ENST00000564770 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
CDH11-210ENST00000564770 ENY2Q9NPA8 101 aa11.43□□□□□ -0.58
CDH11-210ENST00000564770 COPZ2Q9P299 210 aa11.43□□□□□ -0.58
CDH11-210ENST00000564770 FAM25AB3EWG3 89 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 FAM25CB3EWG5 89 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 FAM25GB3EWG6 89 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 ATG12O94817 140 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDH11-210ENST00000564770 OR5AC1P0C628 307 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 SPCS3P61009 180 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 FAAP20Q6NZ36 180 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 OR1S2Q8NGQ3 325 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 RRNAD1Q96FB5 475 aaKnown RBP11.42□□□□□ -0.58
CDH11-210ENST00000564770 ABHD1Q96SE0 405 aa11.42□□□□□ -0.58
CDH11-210ENST00000564770 TRAV30A0A087WSZ9 112 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 NXPH3O95157 252 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 TNFAIP8O95379 198 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 CD74P04233 296 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 IL4P05112 153 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 TBPP20226 339 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 OR10J1P30954 320 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 HTR2BP41595 481 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 DHODHQ02127 395 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 SCGB2B2Q4G0G5 96 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 TERB2Q8NHR7 220 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 NAA50Q9GZZ1 169 aaKnown RBP11.41□□□□□ -0.58
CDH11-210ENST00000564770 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 EXTL2Q9UBQ6 330 aa11.41□□□□□ -0.58
CDH11-210ENST00000564770 RPS10-NUDT3A0A1W2PQS6 291 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 RTL8CO15255 209 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 CDS2O95674 445 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 DEFB1P60022 68 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
CDH11-210ENST00000564770 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 GDF5OSQ5U4N7 250 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 OR52E5Q8NH55 327 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 ZFAND1Q8TCF1 268 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 GLYATL2Q8WU03 294 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 HEYLQ9NQ87 328 aaPredicted RBP11.4□□□□□ -0.58
CDH11-210ENST00000564770 CACNG5Q9UF02 275 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 NACAE9PAV3 2078 aa11.4□□□□□ -0.58
CDH11-210ENST00000564770 H3BMM0 161 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 BUB3O43684 328 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 RAB3DO95716 219 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 SLC25A4P12235 298 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
CDH11-210ENST00000564770 RORCP51449 518 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 MEF2DQ14814 521 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 SIGLEC15Q6ZMC9 328 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 FAM219AQ8IW50 185 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 TMEM229BQ8NBD8 167 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
CDH11-210ENST00000564770 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
CDH11-210ENST00000564770 GPR146Q96CH1 333 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 MUC4Q99102 2169 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 RTBDNQ9BSG5 229 aaPredicted RBP11.39□□□□□ -0.59
CDH11-210ENST00000564770 NAA60Q9H7X0 242 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 NRN1Q9NPD7 142 aa11.39□□□□□ -0.59
CDH11-210ENST00000564770 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
CDH11-210ENST00000564770 B3GALNT1O75752 331 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 HLA-DRB4P13762 266 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 TAS2R19P59542 299 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 CTF1Q16619 201 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 STEAP1BQ6NZ63 245 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 ZNF705AQ6ZN79 300 aaPredicted RBP11.38□□□□□ -0.59
CDH11-210ENST00000564770 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
CDH11-210ENST00000564770 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 Q8WTZ3 238 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 ACY3Q96HD9 319 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 MIXL1Q9H2W2 232 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 HLA-DRB4X5D2U9 266 aa11.38□□□□□ -0.59
CDH11-210ENST00000564770 CEBPZOSA8MTT3 80 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 M0R2N4 97 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 GABARAPO95166 117 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 TOMM40O96008 361 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 P0DMU3 169 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 NPY1RP25929 384 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
CDH11-210ENST00000564770 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
CDH11-210ENST00000564770 TMEM268Q5VZI3 342 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 GSG1LQ6UXU4 331 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 CENPSQ8N2Z9 138 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 NPIPB3Q92617 1050 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 PRR13Q9NZ81 148 aa11.37□□□□□ -0.59
CDH11-210ENST00000564770 TEX13DA0A0J9YY54 714 aaPredicted RBP11.36□□□□□ -0.59
CDH11-210ENST00000564770 PRSS29PA6NIE9 313 aa11.36□□□□□ -0.59
CDH11-210ENST00000564770 ZNF705FA8MVS1 300 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms