RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZNF90Q03938 601 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 COMMD7Q86VX2 200 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 RCC1LQ96I51 464 aaKnown RBP17.16■□□□□ 0.34
LINC01960-201ENST00000563759 TRGV9Q99603 122 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 GSX1Q9H4S2 264 aaPredicted RBP17.16■□□□□ 0.34
LINC01960-201ENST00000563759 ZNF702PQ9H963 129 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 ZNF580Q9UK33 172 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 GNG7O60262 68 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 YIF1AO95070 293 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 H2AFB1P0C5Y9 115 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 PPIFP30405 207 aaKnown RBP17.15■□□□□ 0.34
LINC01960-201ENST00000563759 SELENOTP62341 195 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 KLK9Q2XQG4 91 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 Q56UQ5 140 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 GCSAMLQ5JQS6 135 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 SLC25A22Q9H936 323 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 KLK9Q9UKQ9 250 aa17.15■□□□□ 0.34
LINC01960-201ENST00000563759 A0A1B0GV50 99 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 IGHV3-23P01764 117 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 IGLC1P0CG04 106 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 FAM122CQ6P4D5 195 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 RPP25LQ8N5L8 163 aaKnown RBP17.14■□□□□ 0.33
LINC01960-201ENST00000563759 VN1R17PQ8TDU5 208 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 ZNF418Q8TF45 676 aaPredicted RBP17.14■□□□□ 0.33
LINC01960-201ENST00000563759 ESM1Q9NQ30 184 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 H3BUA1 57 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 TRGV3P03979 118 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 LINC00869P0C866 280 aa17.14■□□□□ 0.33
LINC01960-201ENST00000563759 FAM223BA6NKX1 122 aa17.13■□□□□ 0.33
LINC01960-201ENST00000563759 TPPP2P59282 170 aa17.13■□□□□ 0.33
LINC01960-201ENST00000563759 FAM223AQ8IWN6 122 aa17.13■□□□□ 0.33
LINC01960-201ENST00000563759 SFT2D1Q8WV19 159 aa17.13■□□□□ 0.33
LINC01960-201ENST00000563759 ACTR3CQ9C0K3 210 aaPredicted RBP17.13■□□□□ 0.33
LINC01960-201ENST00000563759 INAFM1C9JVW0 142 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 SCGB2A1O75556 95 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 CDC34P49427 236 aaPredicted RBP17.12■□□□□ 0.33
LINC01960-201ENST00000563759 ZNF726P1Q15940 193 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 MED9Q9NWA0 146 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 TRAV30A0A087WSZ9 112 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 A0A1W2PPV4 95 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 FAM181BA6NEQ2 426 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 ATP6V1G1O75348 118 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 PF4V1P10720 104 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 TIGITQ495A1 244 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 SSX7Q7RTT5 188 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 EEF1AKMT3Q96AZ1 226 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 CUBNO60494 3623 aa17.12■□□□□ 0.33
LINC01960-201ENST00000563759 CTXND1A0A1B0GTU2 59 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 CLDN34H7C241 214 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 FABP1P07148 127 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 CFHR3Q02985 330 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 LCN15Q6UWW0 184 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 LYPD6BQ8NI32 183 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 F8P00451 2351 aa17.11■□□□□ 0.33
LINC01960-201ENST00000563759 MAP1LC3B2A6NCE7 125 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 OR2T8A6NH00 312 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 IGKV1-17P01599 117 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 HBE1P02100 147 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 ATP5G2Q06055 141 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 ZNF502Q8TBZ5 544 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 CITED4Q96RK1 184 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 TXN2Q99757 166 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 MAP1LC3BQ9GZQ8 125 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 F8W735 103 aaPredicted RBP17.1■□□□□ 0.33
LINC01960-201ENST00000563759 HMGB3O15347 200 aaKnown RBP17.1■□□□□ 0.33
LINC01960-201ENST00000563759 EIF3GO75821 320 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC01960-201ENST00000563759 BRI3O95415 125 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 IGLV1-40P01703 118 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 ZNF329Q86UD4 541 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 DOK5Q9P104 306 aa17.1■□□□□ 0.33
LINC01960-201ENST00000563759 SEC14L6B5MCN3 397 aa17.09■□□□□ 0.33
LINC01960-201ENST00000563759 FCGR2BP31994 310 aaPredicted RBP17.09■□□□□ 0.33
LINC01960-201ENST00000563759 GPR183P32249 361 aa17.09■□□□□ 0.33
LINC01960-201ENST00000563759 FGF8P55075 233 aaPredicted RBP17.09■□□□□ 0.33
LINC01960-201ENST00000563759 RHOBP62745 196 aa17.09■□□□□ 0.33
LINC01960-201ENST00000563759 IL34Q6ZMJ4 242 aa17.09■□□□□ 0.33
LINC01960-201ENST00000563759 Q8N2B8 174 aa17.09■□□□□ 0.33
LINC01960-201ENST00000563759 RAB24Q969Q5 203 aa17.09■□□□□ 0.33
LINC01960-201ENST00000563759 NF1P21359 2839 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 TRBV7-1A0A0A6YYK4 115 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 COX7A2P2O60397 106 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 PSG1P11464 419 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 HILS1P60008 231 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 SLC35B1P78383 322 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 MBD3L1Q8WWY6 194 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 MARC2Q969Z3 335 aa17.08■□□□□ 0.33
LINC01960-201ENST00000563759 GAR1Q9NY12 217 aaKnown RBP17.08■□□□□ 0.33
LINC01960-201ENST00000563759 NUDT19A8MXV4 375 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 IGHG4P01861 327 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 RNASE1P07998 156 aaKnown RBP17.07■□□□□ 0.32
LINC01960-201ENST00000563759 RD3LP0DJH9 198 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 FAM78BQ5VT40 261 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 OR1L4Q8NGR5 311 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 CCDC140Q96MF4 163 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 PFDN5Q99471 154 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 SEPSECSQ9HD40 501 aaKnown RBP17.07■□□□□ 0.32
LINC01960-201ENST00000563759 PSMB11A5LHX3 300 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 NUPL2O15504 423 aaKnown RBP17.07■□□□□ 0.32
LINC01960-201ENST00000563759 CRYBA1P05813 215 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 SPSB3Q6PJ21 355 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms