RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 SCRT1Q9BWW7 348 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 XCL2Q9UBD3 114 aa13.38□□□□□ -0.27
NME3-204ENST00000563498 FAM90A26D6RGX4 464 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 ATP6V1G2O95670 118 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 SLC25A4P12235 298 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 SPCS3P61009 180 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 TRIM16LQ309B1 348 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 ZNF705AQ6ZN79 300 aaPredicted RBP13.37□□□□□ -0.27
NME3-204ENST00000563498 ARRDC1Q8N5I2 433 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 OR52E5Q8NH55 327 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 YIPF6Q96EC8 236 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 NRN1Q9NPD7 142 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 COMMD3Q9UBI1 195 aa13.37□□□□□ -0.27
NME3-204ENST00000563498 ABCA13Q86UQ4 5058 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 TMEM189A5PLL7 270 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 SMIM9A6NGZ8 99 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 B3GALNT1O75752 331 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 IFNA10P01566 189 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 SPART-AS1P0CW21 52 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 UCP1P25874 307 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 LSM3P62310 102 aaKnown RBP13.36□□□□□ -0.27
NME3-204ENST00000563498 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
NME3-204ENST00000563498 PRSS54Q6PEW0 395 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
NME3-204ENST00000563498 MUC4Q99102 2169 aa13.36□□□□□ -0.27
NME3-204ENST00000563498 A0A0G2JRQ6 117 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 ZNF705FA8MVS1 300 aaPredicted RBP13.35□□□□□ -0.27
NME3-204ENST00000563498 IFNA21P01568 189 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 ZNF705DP0CH99 300 aaPredicted RBP13.35□□□□□ -0.27
NME3-204ENST00000563498 ZNF705BP0CI00 300 aaPredicted RBP13.35□□□□□ -0.27
NME3-204ENST00000563498 HLA-DRB4P13762 266 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 OR10J1P30954 320 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 RND2P52198 227 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 DHODHQ02127 395 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 C2orf83Q53S99 150 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 Q6ZR54 194 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 FAM219AQ8IW50 185 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 CCDC71LQ8N9Z2 235 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 HLA-DRB4X5D2U9 266 aa13.35□□□□□ -0.27
NME3-204ENST00000563498 BUB3O43684 328 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 GSTZ1O43708 216 aaPredicted RBP13.34□□□□□ -0.27
NME3-204ENST00000563498 ELK1P19419 428 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 TBPP20226 339 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 USF2Q15853 346 aaPredicted RBP13.34□□□□□ -0.27
NME3-204ENST00000563498 SP6Q3SY56 376 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 SIGLEC15Q6ZMC9 328 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 Q6ZRM9 215 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 RNASE11Q8TAA1 199 aaKnown RBP13.34□□□□□ -0.27
NME3-204ENST00000563498 ZFAND1Q8TCF1 268 aa13.34□□□□□ -0.27
NME3-204ENST00000563498 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
NME3-204ENST00000563498 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
NME3-204ENST00000563498 IL4P05112 153 aa13.33□□□□□ -0.28
NME3-204ENST00000563498 NKX2-1P43699 371 aaPredicted RBP13.33□□□□□ -0.28
NME3-204ENST00000563498 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
NME3-204ENST00000563498 HEYLQ9NQ87 328 aaPredicted RBP13.33□□□□□ -0.28
NME3-204ENST00000563498 CDS2O95674 445 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 CD3DP04234 171 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 RNF212Q495C1 297 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 SOHLH1Q5JUK2 328 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 UBE2DNLQ8IWF7 75 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 SLC24A4Q8NFF2 622 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 TERB2Q8NHR7 220 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 KLK11Q9UBX7 282 aa13.32□□□□□ -0.28
NME3-204ENST00000563498 HPGDSO60760 199 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 TOMM40O96008 361 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 OR13C8Q8NGS7 320 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 CLUHP3Q96NS8 147 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 ABHD1Q96SE0 405 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 TMEM222Q9H0R3 208 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 VCX3AQ9NNX9 186 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 DKK2Q9UBU2 259 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 RFNGQ9Y644 331 aa13.31□□□□□ -0.28
NME3-204ENST00000563498 NUP62P37198 522 aaPredicted RBP13.3□□□□□ -0.28
NME3-204ENST00000563498 EMP1P54849 157 aa13.3□□□□□ -0.28
NME3-204ENST00000563498 OXA1LQ15070 435 aa13.3□□□□□ -0.28
NME3-204ENST00000563498 TMEM170AQ8WVE7 144 aa13.3□□□□□ -0.28
NME3-204ENST00000563498 MTFP1Q9UDX5 166 aa13.3□□□□□ -0.28
NME3-204ENST00000563498 IGLV2-18A0A075B6J9 118 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 GDF5OSQ5U4N7 250 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 NOXA1Q86UR1 476 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 GLYATL2Q8WU03 294 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 NPIPB3Q92617 1050 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 RBPMSQ93062 196 aaKnown RBP13.29□□□□□ -0.28
NME3-204ENST00000563498 NIPSNAP3BQ9BS92 247 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 SAV1Q9H4B6 383 aaPredicted RBP13.29□□□□□ -0.28
NME3-204ENST00000563498 CACFD1Q9UGQ2 172 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 PFDN2Q9UHV9 154 aa13.29□□□□□ -0.28
NME3-204ENST00000563498 CEBPZOSA8MTT3 80 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 NXPH3O95157 252 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 OR5AC1P0C628 307 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 PSG1P11464 419 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 NCS1P62166 190 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 RNASE12Q5GAN4 147 aaKnown RBP13.28□□□□□ -0.28
NME3-204ENST00000563498 FAM222AQ5U5X8 452 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
NME3-204ENST00000563498 ZNF709Q8N972 641 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms