RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TRAV14DV4A0A0A6YYC5 116 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 LCE6AA0A183 80 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 MPTX1A8MV57 137 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 ZNF207O43670 478 aaKnown RBP12.44□□□□□ -0.42
CDT1-202ENST00000562747 IFNA4P05014 189 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 H2AFB2P0C5Z0 115 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 IAPPP10997 89 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 RND2P52198 227 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 RPP30P78346 268 aaKnown RBP12.44□□□□□ -0.42
CDT1-202ENST00000562747 ID3Q02535 119 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 TOMM20LQ6UXN7 152 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
CDT1-202ENST00000562747 OR1S2Q8NGQ3 325 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 SMPXQ9UHP9 88 aa12.44□□□□□ -0.42
CDT1-202ENST00000562747 PUS1Q9Y606 427 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDT1-202ENST00000562747 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 IGKV1-17P01599 117 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 LYL1P12980 280 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 GPX4P36969 197 aaPredicted RBP12.43□□□□□ -0.42
CDT1-202ENST00000562747 CD81P60033 236 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 RAB11AP62491 216 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 LAMTOR1Q6IAA8 161 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
CDT1-202ENST00000562747 NEURL2Q9BR09 285 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 ZFAND3Q9H8U3 227 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 C19orf73Q9NVV2 129 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 SELENOKQ9Y6D0 94 aa12.43□□□□□ -0.42
CDT1-202ENST00000562747 WRBO00258 174 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 CHEK1O14757 476 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 SCAF4O95104 1147 aaKnown RBP12.42□□□□□ -0.42
CDT1-202ENST00000562747 IGLC1P0CG04 106 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 OR10J1P30954 320 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 BMI1P35226 326 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
CDT1-202ENST00000562747 IFITM3Q01628 133 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 ENKURQ8TC29 256 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 SPAG8Q99932 426 aaPredicted RBP12.42□□□□□ -0.42
CDT1-202ENST00000562747 RHPN1-AS1Q9BWJ2 59 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
CDT1-202ENST00000562747 TSPAN4O14817 238 aa12.41□□□□□ -0.42
CDT1-202ENST00000562747 CD7P09564 240 aa12.41□□□□□ -0.42
CDT1-202ENST00000562747 YPEL3P61236 119 aaPredicted RBP12.41□□□□□ -0.42
CDT1-202ENST00000562747 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
CDT1-202ENST00000562747 TIGITQ495A1 244 aa12.41□□□□□ -0.42
CDT1-202ENST00000562747 NPIPB3Q92617 1050 aa12.41□□□□□ -0.42
CDT1-202ENST00000562747 HYDINQ4G0P3 5121 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 CD5P06127 495 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDT1-202ENST00000562747 ZBTB8BQ8NAP8 495 aaPredicted RBP12.4□□□□□ -0.42
CDT1-202ENST00000562747 ACY3Q96HD9 319 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 SLC35E1Q96K37 410 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 CITED4Q96RK1 184 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 SEC22CQ9BRL7 303 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 TUBA4BQ9H853 241 aa12.4□□□□□ -0.42
CDT1-202ENST00000562747 IL5P05113 134 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 GAMTQ14353 236 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 SPANXN5Q5MJ07 72 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 C12orf45Q8N5I9 185 aaPredicted RBP12.39□□□□□ -0.43
CDT1-202ENST00000562747 Q8WTZ3 238 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 METTL26Q96S19 204 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 RNF2Q99496 336 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
CDT1-202ENST00000562747 PAIP2BQ9ULR5 123 aaKnown RBP12.39□□□□□ -0.43
CDT1-202ENST00000562747 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
CDT1-202ENST00000562747 IGHV3-49A0A0A0MS15 119 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 OR11H12B2RN74 326 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 TOMM40O96008 361 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 NPPCP23582 126 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 CRYBB3P26998 211 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 DEFA1P59665 94 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 DEFA3P59666 94 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 TM2D3Q9BRN9 247 aa12.38□□□□□ -0.43
CDT1-202ENST00000562747 A0A1W2PS18 150 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 PRSS46E5RG02 174 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 SSSCA1O60232 199 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 FAM90A2PQ658T7 463 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 NRARPQ7Z6K4 114 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 ST8SIA2Q92186 375 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 ZMAT4Q9H898 229 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 PSENENQ9NZ42 101 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 GSKIPQ9P0R6 139 aa12.37□□□□□ -0.43
CDT1-202ENST00000562747 IGHV3OR16-13A0A075B7E8 117 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 IGHV3-74A0A0B4J1X5 117 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 ZFP92A6NM28 416 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 H3BP45 60 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 CCSO14618 274 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 APOHP02749 345 aaPredicted RBP12.36□□□□□ -0.43
CDT1-202ENST00000562747 RD3LP0DJH9 198 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 TAS2R30P59541 319 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 TCF24Q7RTU0 167 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms