RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 GGACTQ9BVM4 153 aa8.23□□□□□ -1.09
TPM1-229ENST00000561242 KLK9Q9UKQ9 250 aa8.23□□□□□ -1.09
TPM1-229ENST00000561242 G3V4G9 280 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 K7EMT4 169 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 K7EPK0 472 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 IFNA5P01569 189 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 FOLR2P14207 255 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 CBLN1P23435 193 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 AP2S1P53680 142 aaPredicted RBP8.22□□□□□ -1.09
TPM1-229ENST00000561242 MFAP2P55001 183 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 RAP2BP61225 183 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 RRAS2P62070 204 aaPredicted RBP8.22□□□□□ -1.09
TPM1-229ENST00000561242 RAB32Q13637 225 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 INO80EQ8NBZ0 244 aaPredicted RBP8.22□□□□□ -1.09
TPM1-229ENST00000561242 TMEM116Q8NCL8 245 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 OR51G1Q8NGK1 321 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 SCGB1C1Q8TD33 95 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 TUBA4BQ9H853 241 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 RABAC1Q9UI14 185 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 ZNF256Q9Y2P7 627 aaPredicted RBP8.22□□□□□ -1.09
TPM1-229ENST00000561242 PUS1Q9Y606 427 aaKnown RBP eCLIP8.22□□□□□ -1.09
TPM1-229ENST00000561242 ATRQ13535 2644 aa8.22□□□□□ -1.09
TPM1-229ENST00000561242 NF1P21359 2839 aa8.21□□□□□ -1.09
TPM1-229ENST00000561242 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 IL4P05112 153 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 CTSGP08311 255 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 SPNP16150 400 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 P2RY1P47900 373 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 YPEL3P61236 119 aaPredicted RBP8.21□□□□□ -1.1
TPM1-229ENST00000561242 SELENOTP62341 195 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 DLK1P80370 383 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 TIGITQ495A1 244 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 PRSS54Q6PEW0 395 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 TEPPQ6URK8 271 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 Q6ZRG5 221 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 TMEM217Q8N7C4 229 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 TMEM147Q9BVK8 224 aa8.21□□□□□ -1.1
TPM1-229ENST00000561242 ZNF436Q9C0F3 470 aaPredicted RBP8.21□□□□□ -1.1
TPM1-229ENST00000561242 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
TPM1-229ENST00000561242 C7orf66A4D0T2 115 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 C17orf112F2Z3M2 114 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 ZNF207O43670 478 aaKnown RBP8.2□□□□□ -1.1
TPM1-229ENST00000561242 DEDDO75618 318 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 DFFBO76075 338 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 HNRNPCP07910 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPM1-229ENST00000561242 GP9P14770 177 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 SULT1A1P50225 295 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 LYZP61626 148 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 DEFA6Q01524 100 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 BAXQ07812 192 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 SLC38A11Q08AI6 406 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 GAMTQ14353 236 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 MLANAQ16655 118 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 TM4SF20Q53R12 229 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 MRAPQ8TCY5 172 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 PPP1R1CQ8WVI7 109 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 CHRDL1Q9BU40 450 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 KCNIP2Q9NS61 270 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 UQCC1Q9NVA1 299 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 SIGLEC8Q9NYZ4 499 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 SVEP1Q4LDE5 3571 aa8.2□□□□□ -1.1
TPM1-229ENST00000561242 TRAV25A0A0B4J276 109 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 HELTA6NFD8 242 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 FAM24AA6NFZ4 105 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 OR4C46A6NHA9 309 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 CST7O76096 145 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 TOMM40O96008 361 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 CSN3P07498 182 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 OR2F1Q13607 317 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 OXA1LQ15070 435 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 ACOT7LQ6ZUV0 252 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 TMEM144Q7Z5S9 345 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 TRGV9Q99603 122 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 RHPN1-AS1Q9BWJ2 59 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 FNDC4Q9H6D8 234 aaPredicted RBP8.19□□□□□ -1.1
TPM1-229ENST00000561242 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
TPM1-229ENST00000561242 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 DMRT1Q9Y5R6 373 aa8.19□□□□□ -1.1
TPM1-229ENST00000561242 MXRA5Q9NR99 2828 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 IGHV3OR16-8A0A075B7F1 116 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 IGHV7-4-1A0A0J9YVY3 117 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 FNDC10F2Z333 226 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 OR5G3P0C626 314 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 ORM2P19652 201 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 TMEM14EPQ6UXP3 125 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 ZNF546Q86UE3 836 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 STPG3Q8N7X2 389 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 OR1B1Q8NGR6 318 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 LRRC20Q8TCA0 184 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 SMPXQ9UHP9 88 aa8.18□□□□□ -1.1
TPM1-229ENST00000561242 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 A8MWP6 167 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 COX7A2P2O60397 106 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms