RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TECRQ9NZ01 308 aaKnown RBP13.47□□□□□ -0.25
HDDC3-206ENST00000561036 ELOA3CA0A087WX78 387 aaPredicted RBP13.46□□□□□ -0.25
HDDC3-206ENST00000561036 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 GATA2P23769 480 aaPredicted RBP13.46□□□□□ -0.25
HDDC3-206ENST00000561036 MFAP4P55083 255 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 TAS2R45P59539 299 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 PLP1P60201 277 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 ZNF90Q03938 601 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 DEFB112Q30KQ8 113 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 OR5T1Q8NG75 326 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 VN1R17PQ8TDU5 208 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 RXFP4Q8TDU9 374 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 TXN2Q99757 166 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 TMUB1Q9BVT8 246 aa13.46□□□□□ -0.25
HDDC3-206ENST00000561036 IGHV3-21A0A0B4J1V1 117 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 SCGB2A1O75556 95 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 ARL14EPLP0DKL9 152 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 FCGR2BP31994 310 aaPredicted RBP13.45□□□□□ -0.26
HDDC3-206ENST00000561036 DEFA5Q01523 94 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 LY6EQ16553 131 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 C19orf54Q5BKX5 351 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 TXNDC17Q9BRA2 123 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 TMPRSS5Q9H3S3 457 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
HDDC3-206ENST00000561036 EIF3GO75821 320 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDDC3-206ENST00000561036 IGHG2P01859 326 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 IGF1P05019 195 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 C8orf88P0DMB2 117 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 GCHFRP30047 84 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 IER3P46695 156 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 ECSCRQ19T08 205 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 SOHLH1Q5JUK2 328 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 C10orf113Q5VZT2 155 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 SPNS3Q6ZMD2 512 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 IQCF2Q8IXL9 164 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 BCL6BQ8N143 479 aaPredicted RBP13.44□□□□□ -0.26
HDDC3-206ENST00000561036 SUN5Q8TC36 379 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 PRDM13Q9H4Q3 707 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 ARL2-SNX15V9GYD0 113 aa13.44□□□□□ -0.26
HDDC3-206ENST00000561036 TRBV9A0A0B4J1U6 114 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 NDUFB8O95169 186 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 SNAPINO95295 136 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 BRI3O95415 125 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 YPEL3P61236 119 aaPredicted RBP13.43□□□□□ -0.26
HDDC3-206ENST00000561036 MEF2BQ02080 365 aaPredicted RBP13.43□□□□□ -0.26
HDDC3-206ENST00000561036 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 TMEM167BQ9NRX6 74 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 C21orf62Q9NYP8 219 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 FBXL7Q9UJT9 491 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 POLQO75417 2590 aa13.43□□□□□ -0.26
HDDC3-206ENST00000561036 ASH1LQ9NR48 2969 aaKnown RBP13.42□□□□□ -0.26
HDDC3-206ENST00000561036 LINC01548A6NM66 108 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 TMEM250H0YL14 139 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 HYPMO75409 117 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 RD3LP0DJH9 198 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 GUCA2BQ16661 112 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 TIGITQ495A1 244 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 Q6YL49 198 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 NECAP1Q8NC96 275 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 ATP6V0BQ99437 205 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 GAR1Q9NY12 217 aaKnown RBP13.42□□□□□ -0.26
HDDC3-206ENST00000561036 APCP25054 2843 aa13.42□□□□□ -0.26
HDDC3-206ENST00000561036 HELZ2Q9BYK8 2649 aaKnown RBP13.42□□□□□ -0.26
HDDC3-206ENST00000561036 ABCA12Q86UK0 2595 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 MDFIC2A0A1B0GVS7 189 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 SH2D7A6NKC9 451 aaPredicted RBP13.41□□□□□ -0.26
HDDC3-206ENST00000561036 H3BUA1 57 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 GNG7O60262 68 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 PAGE4O60829 102 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 OR2J3O76001 311 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 TOMM40O96008 361 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 STXBP6Q8NFX7 210 aa13.41□□□□□ -0.26
HDDC3-206ENST00000561036 G3V318 75 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 PDE6DO43924 150 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 PSG1P11464 419 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 CD81P60033 236 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 RHOGP84095 191 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 Q56UQ5 140 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 C9orf152Q5JTZ5 239 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 CIARTQ8N365 385 aaPredicted RBP13.4□□□□□ -0.26
HDDC3-206ENST00000561036 OR51G1Q8NGK1 321 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 FAM167A-AS1Q96KT0 104 aa13.4□□□□□ -0.26
HDDC3-206ENST00000561036 NKX6-2Q9C056 277 aaPredicted RBP13.4□□□□□ -0.26
HDDC3-206ENST00000561036 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
HDDC3-206ENST00000561036 CENPEQ02224 2701 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 FAM223BA6NKX1 122 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 F8W735 103 aaPredicted RBP13.39□□□□□ -0.27
HDDC3-206ENST00000561036 AP4M1O00189 453 aa13.39□□□□□ -0.27
HDDC3-206ENST00000561036 ORM2P19652 201 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms