RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SPARTQ8N0X7 666 aa13.13□□□□□ -0.31
TPM1-226ENST00000560959 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
TPM1-226ENST00000560959 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
TPM1-226ENST00000560959 DNAH5Q8TE73 4624 aa13.12□□□□□ -0.31
TPM1-226ENST00000560959 TAS2R20P59543 309 aa13.12□□□□□ -0.31
TPM1-226ENST00000560959 TSPAN5P62079 268 aa13.12□□□□□ -0.31
TPM1-226ENST00000560959 C6orf223Q8N319 242 aa13.12□□□□□ -0.31
TPM1-226ENST00000560959 OR1S2Q8NGQ3 325 aa13.12□□□□□ -0.31
TPM1-226ENST00000560959 PDCD10Q9BUL8 212 aa13.12□□□□□ -0.31
TPM1-226ENST00000560959 RPS10-NUDT3A0A1W2PQS6 291 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 BUB3O43684 328 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 ATG12O94817 140 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 TMEM88Q6PEY1 159 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 ENY2Q9NPA8 101 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 SCRT2Q9NQ03 307 aa13.11□□□□□ -0.31
TPM1-226ENST00000560959 NACAE9PAV3 2078 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 NBDYA0A0U1RRE5 68 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 GSTZ1O43708 216 aaPredicted RBP13.1□□□□□ -0.31
TPM1-226ENST00000560959 IGKV1-5P01602 117 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 IGLC1P0CG04 106 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 PRSS3P35030 304 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 ETV6P41212 452 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
TPM1-226ENST00000560959 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
TPM1-226ENST00000560959 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 SLC25A4P12235 298 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 HTN3P15516 51 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 ALDH3B2P48448 385 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 RND3P61587 244 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 DHODHQ02127 395 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 UBE2NLQ5JXB2 153 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
TPM1-226ENST00000560959 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
TPM1-226ENST00000560959 HBE1P02100 147 aa13.08□□□□□ -0.32
TPM1-226ENST00000560959 FOXI2Q6ZQN5 318 aa13.08□□□□□ -0.32
TPM1-226ENST00000560959 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
TPM1-226ENST00000560959 ZNF486Q96H40 463 aaPredicted RBP13.08□□□□□ -0.32
TPM1-226ENST00000560959 ATG101Q9BSB4 218 aa13.08□□□□□ -0.32
TPM1-226ENST00000560959 GOLT1BQ9Y3E0 138 aa13.08□□□□□ -0.32
TPM1-226ENST00000560959 YTHDF2Q9Y5A9 579 aaKnown RBP13.08□□□□□ -0.32
TPM1-226ENST00000560959 OR10J1P30954 320 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 HTR2BP41595 481 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 AKR1C2P52895 323 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 DAD1P61803 113 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
TPM1-226ENST00000560959 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 PRSS54Q6PEW0 395 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 GSG1LQ6UXU4 331 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 RNASEH2CQ8TDP1 164 aaKnown RBP13.07□□□□□ -0.32
TPM1-226ENST00000560959 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
TPM1-226ENST00000560959 LOC102723971A0A1B0GUV8 181 aa13.06□□□□□ -0.32
TPM1-226ENST00000560959 IL4P05112 153 aa13.06□□□□□ -0.32
TPM1-226ENST00000560959 AARDQ4LEZ3 155 aa13.06□□□□□ -0.32
TPM1-226ENST00000560959 OR52E5Q8NH55 327 aa13.06□□□□□ -0.32
TPM1-226ENST00000560959 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
TPM1-226ENST00000560959 RAB26Q9ULW5 256 aa13.06□□□□□ -0.32
TPM1-226ENST00000560959 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 RD3LP0DJH9 198 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 NUP62P37198 522 aaPredicted RBP13.05□□□□□ -0.32
TPM1-226ENST00000560959 ID1P41134 155 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 RND2P52198 227 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 FXYD7P58549 80 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 SPCS3P61009 180 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 ZNF79Q15937 498 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 C2orf83Q53S99 150 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 ETFRF1Q6IPR1 90 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 IZUMO2Q6UXV1 221 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 C1orf158Q8N1D5 194 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 TP53RKQ96S44 253 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 PFDN2Q9UHV9 154 aa13.05□□□□□ -0.32
TPM1-226ENST00000560959 TOMM40O96008 361 aa13.04□□□□□ -0.32
TPM1-226ENST00000560959 IGKV3-20P01619 116 aa13.04□□□□□ -0.32
TPM1-226ENST00000560959 PSMB3P49720 205 aa13.04□□□□□ -0.32
TPM1-226ENST00000560959 PSG9Q00887 426 aa13.04□□□□□ -0.32
TPM1-226ENST00000560959 RRNAD1Q96FB5 475 aaKnown RBP13.04□□□□□ -0.32
TPM1-226ENST00000560959 KLK11Q9UBX7 282 aa13.04□□□□□ -0.32
TPM1-226ENST00000560959 PAX9P55771 341 aa13.03□□□□□ -0.32
TPM1-226ENST00000560959 PIGPP57054 158 aa13.03□□□□□ -0.32
TPM1-226ENST00000560959 SAMD12Q8N8I0 201 aa13.03□□□□□ -0.32
TPM1-226ENST00000560959 C7orf50Q9BRJ6 194 aaKnown RBP13.03□□□□□ -0.32
TPM1-226ENST00000560959 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 LYRM9A8MSI8 78 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 B3GALNT1O75752 331 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 PGAM2P15259 253 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 RCVRNP35243 200 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 FAM219AQ8IW50 185 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 OR4B1Q8NGF8 309 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 SLC35B3Q9H1N7 401 aa13.02□□□□□ -0.33
TPM1-226ENST00000560959 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.02□□□□□ -0.33
TPM1-226ENST00000560959 CCL18P55774 89 aa13.01□□□□□ -0.33
TPM1-226ENST00000560959 C1orf194Q5T5A4 169 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms