RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 RAB11AP62491 216 aa11.68□□□□□ -0.54
RABGGTA-219ENST00000560871 OR1S2Q8NGQ3 325 aa11.68□□□□□ -0.54
RABGGTA-219ENST00000560871 GPN1Q9HCN4 374 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-219ENST00000560871 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
RABGGTA-219ENST00000560871 TRAV30A0A087WSZ9 112 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 PTTG1O95997 202 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 OR10J1P30954 320 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 TIGITQ495A1 244 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 NPIPB3Q92617 1050 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 ACY3Q96HD9 319 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 SMIM8Q96KF7 97 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 SELENOKQ9Y6D0 94 aa11.67□□□□□ -0.54
RABGGTA-219ENST00000560871 IGHV7-4-1A0A0J9YVY3 117 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 FAM25EA8MYX2 175 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 YIF1AO95070 293 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 SCAF4O95104 1147 aaKnown RBP11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 IL15RAQ13261 267 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 GAMTQ14353 236 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 Q8N1Y9 231 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 WDR89Q96FK6 387 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 C2orf50Q96LR7 162 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 RAB40CQ96S21 281 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 PSENENQ9NZ42 101 aa11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 STRAPQ9Y3F4 350 aaKnown RBP11.66□□□□□ -0.54
RABGGTA-219ENST00000560871 IGKV1D-37A0A075B6S9 117 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 C7orf66A4D0T2 115 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 C5orf51A6NDU8 294 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 K7EPK0 472 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 NHLRC4P0CG21 123 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 TAS2R30P59541 319 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 TMEM14EPQ6UXP3 125 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 GSG1LQ6UXU4 331 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 SMPXQ9UHP9 88 aa11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-219ENST00000560871 TRAV14DV4A0A0A6YYC5 116 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 TSC22D2O75157 780 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 CCNKO75909 580 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 TOMM40O96008 361 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 ACOT7LQ6ZUV0 252 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 SMAD5-AS1Q9Y6J3 95 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 SORL1Q92673 2214 aa11.64□□□□□ -0.55
RABGGTA-219ENST00000560871 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 GOSR2O14653 212 aa11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 CHEK1O14757 476 aa11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 APOHP02749 345 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 THAP8Q8NA92 274 aa11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 RHPN1-AS1Q9BWJ2 59 aa11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 LSM5Q9Y4Y9 91 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-219ENST00000560871 IGHV3-49A0A0A0MS15 119 aa11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 CD7P09564 240 aa11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 RAB32Q13637 225 aa11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 USF2Q15853 346 aaPredicted RBP11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 Q8WTZ3 238 aa11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 RNF2Q99496 336 aa11.62□□□□□ -0.55
RABGGTA-219ENST00000560871 IGHV3OR16-13A0A075B7E8 117 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 IGHV3-74A0A0B4J1X5 117 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 ZFP92A6NM28 416 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 A8MZ25 164 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 TSPAN4O14817 238 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 SIX6O95475 246 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 IL4P05112 153 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 METTL15P1P0C7V9 234 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 PSG1P11464 419 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 CRYBB3P26998 211 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 CD81P60033 236 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 ZNF90Q03938 601 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 GUCA2BQ16661 112 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 FAM90A2PQ658T7 463 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 GTSCR1Q86UQ5 136 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 WWC2-AS2Q96NR7 200 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 TRGV9Q99603 122 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 SPAG8Q99932 426 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 U3KQE9 123 aa11.61□□□□□ -0.55
RABGGTA-219ENST00000560871 RD3LP0DJH9 198 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 IGHV4-30-4P0DP06 118 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 H2BFSP57053 126 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 DLK1P80370 383 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 ARL16Q0P5N6 197 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 RBPMS2Q6ZRY4 209 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 LILRB2Q8N423 598 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 METTL26Q96S19 204 aa11.6□□□□□ -0.55
RABGGTA-219ENST00000560871 ASCL2Q99929 193 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms