RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TM2D3Q9BRN9 247 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 MAGT1Q9H0U3 335 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 RBMY1BA6NDE4 496 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 RBMY1EA6NEQ0 496 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 WRBO00258 174 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 LYRM1O43325 122 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 ADAP1O75689 374 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 RBMY1DP0C7P1 496 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 SLC25A6P12236 298 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 RAB11AP62491 216 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 TCF24Q7RTU0 167 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 LYG2Q86SG7 212 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 WFDC3Q8IUB2 231 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 TMEM170AQ8WVE7 144 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 NPIPB3Q92617 1050 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 TMEM231Q9H6L2 316 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
CTDSPL2-209ENST00000560620 A0A1W2PS18 150 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 FAM90A26D6RGX4 464 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 PITX3O75364 302 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 APOHP02749 345 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 IGLC1P0CG04 106 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 BTCP35070 178 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 RPP30P78346 268 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 DHRS2Q13268 280 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 CNPY1Q3B7I2 92 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 OR1S2Q8NGQ3 325 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 ST8SIA2Q92186 375 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 ZNF414Q96IQ9 312 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 CIB3Q96Q77 187 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 C20orf85Q9H1P6 137 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 RETNQ9HD89 108 aa9.69□□□□□ -0.86
CTDSPL2-209ENST00000560620 LOC102724200A0A096LPH7 203 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 PLA2G10O15496 165 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 SYNGR2O43760 224 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 DFFBO76075 338 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 IGKV1-17P01599 117 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 CD5P06127 495 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 ATP5IP56385 69 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 GRAMD2BQ96HH9 432 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 SLC35E1Q96K37 410 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 CCDC32Q9BV29 185 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 RABAC1Q9UI14 185 aa9.68□□□□□ -0.86
CTDSPL2-209ENST00000560620 TRAV6A0A075B6T7 132 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 SCGB1D2O95969 90 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 TCRBP04435 133 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 IL4P05112 153 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 RD3LP0DJH9 198 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 YPEL3P61236 119 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 SPANXN5Q5MJ07 72 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 LINC00322Q6ZN03 302 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 FAM110AQ9BQ89 295 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 NUDT15Q9NV35 164 aa9.67□□□□□ -0.86
CTDSPL2-209ENST00000560620 MPTX1A8MV57 137 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 H3BP45 60 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 P2RY1P47900 373 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 GAMTQ14353 236 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 MZT2BQ6NZ67 158 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 APRG1Q8IVJ8 170 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 STXBP6Q8NFX7 210 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 MS4A6AQ9H2W1 248 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 VSIRQ9H7M9 311 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 GSKIPQ9P0R6 139 aa9.66□□□□□ -0.86
CTDSPL2-209ENST00000560620 FAM240BA0A1B0GVZ2 78 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 A6NHS1 94 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 SSSCA1O60232 199 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 TOMM40O96008 361 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 FABP1P07148 127 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 HNRNPCP07910 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 CRYBB3P26998 211 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 GPX4P36969 197 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 NKX2-1P43699 371 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 EIF2B2P49770 351 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 APOC4P55056 127 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 POLR2GP62487 172 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 IAH1Q2TAA2 248 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 FAM90A2PQ658T7 463 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 LINC00299Q6ZSB3 139 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 MUC7Q8TAX7 377 aa9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-209ENST00000560620 FAM25EA8MYX2 175 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 PSG1P11464 419 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 ZNF846Q147U1 533 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 USF2Q15853 346 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 OR51G1Q8NGK1 321 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 MITD1Q8WV92 249 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 WDR12Q9GZL7 423 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 PSENENQ9NZ42 101 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 PTTG2Q9NZH5 202 aa9.64□□□□□ -0.87
CTDSPL2-209ENST00000560620 SMCO3A2RU48 225 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms