RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 MLANAQ16655 118 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 DEFB114Q30KQ6 69 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 TMEM14EPQ6UXP3 125 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 NPIPB3Q92617 1050 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 ACY3Q96HD9 319 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 ZNF414Q96IQ9 312 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 C20orf24Q9BUV8 137 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 PAIP2BQ9ULR5 123 aaKnown RBP9.85□□□□□ -0.83
NEDD8-208ENST00000560427 PUS1Q9Y606 427 aaKnown RBP eCLIP9.85□□□□□ -0.83
NEDD8-208ENST00000560427 TRAV25A0A0B4J276 109 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 H3BP45 60 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 K7EIL1 84 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 L7N2F9 121 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 GOSR2O14653 212 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 SSNA1O43805 119 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-208ENST00000560427 FABP1P07148 127 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 VAMP2P63027 116 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 IL15RAQ13261 267 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 GAMTQ14353 236 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 CD300EQ496F6 205 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-208ENST00000560427 TOMM20LQ6UXN7 152 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 NMES1Q9C002 83 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 ZFAND3Q9H8U3 227 aa9.84□□□□□ -0.83
NEDD8-208ENST00000560427 DNAH3Q8TD57 4116 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 WI2-2373I1.2A0A1W2PRP0 233 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 FNDC10F2Z333 226 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 K7EPK0 472 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 TOMM40O96008 361 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 CD5P06127 495 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 PAX9P55771 341 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 TIGITQ495A1 244 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 BTNL8Q6UX41 500 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 HAPLN4Q86UW8 402 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 Q8WTZ3 238 aa9.83□□□□□ -0.84
NEDD8-208ENST00000560427 TRAV14DV4A0A0A6YYC5 116 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 IGHV7-4-1A0A0J9YVY3 117 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 ZFP92A6NM28 416 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 S100A10P60903 97 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 GTSCR1Q86UQ5 136 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 THAP8Q8NA92 274 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 OR10P1Q8NGE3 313 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 PRR25Q96S07 402 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 METTL26Q96S19 204 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 TRGV9Q99603 122 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 GGACTQ9BVM4 153 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 TMEM231Q9H6L2 316 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 MLXQ9UH92 298 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 SMPXQ9UHP9 88 aa9.82□□□□□ -0.84
NEDD8-208ENST00000560427 LSM5Q9Y4Y9 91 aaKnown RBP9.82□□□□□ -0.84
NEDD8-208ENST00000560427 A0A1W2PS18 150 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 PMS2P5A8MQ11 134 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 CFDP00746 253 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-208ENST00000560427 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 EDN2P20800 178 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 NUP62P37198 522 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-208ENST00000560427 DLK1P80370 383 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 RAB32Q13637 225 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 LAMTOR1Q6IAA8 161 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 OR8G2PQ6IF36 304 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 RBPMS2Q6ZRY4 209 aaKnown RBP9.81□□□□□ -0.84
NEDD8-208ENST00000560427 TMEM61Q8N0U2 210 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 NARS2Q96I59 477 aaKnown RBP9.81□□□□□ -0.84
NEDD8-208ENST00000560427 SPAG8Q99932 426 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-208ENST00000560427 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 C11orf1Q9H5F2 150 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 LYRM2Q9NU23 88 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-208ENST00000560427 ALG5Q9Y673 324 aa9.81□□□□□ -0.84
NEDD8-208ENST00000560427 IGHV3OR16-8A0A075B7F1 116 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 CHEK1O14757 476 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 TSPAN4O14817 238 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 DEDDO75618 318 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 RLN2P04090 185 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 METTL15P1P0C7V9 234 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 PET100P0DJ07 73 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 NPPCP23582 126 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 CRYBB3P26998 211 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 BCAP31P51572 246 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 CAV2P51636 162 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 H2BFSP57053 126 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 AKR1C1Q04828 323 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 OXA1LQ15070 435 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 TMEM144Q7Z5S9 345 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 OR51G1Q8NGK1 321 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 MGAT4CQ9UBM8 478 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 LSM4Q9Y4Z0 139 aaKnown RBP9.8□□□□□ -0.84
NEDD8-208ENST00000560427 SMAD5-AS1Q9Y6J3 95 aa9.8□□□□□ -0.84
NEDD8-208ENST00000560427 IGKV1D-37A0A075B6S9 117 aa9.79□□□□□ -0.84
NEDD8-208ENST00000560427 IZUMO1RA6ND01 250 aa9.79□□□□□ -0.84
NEDD8-208ENST00000560427 ZNF785A8K8V0 405 aa9.79□□□□□ -0.84
NEDD8-208ENST00000560427 ZNF207O43670 478 aaKnown RBP9.79□□□□□ -0.84
NEDD8-208ENST00000560427 IL4P05112 153 aa9.79□□□□□ -0.84
NEDD8-208ENST00000560427 PSG1P11464 419 aa9.79□□□□□ -0.84
NEDD8-208ENST00000560427 STX12Q86Y82 276 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms