RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PROP1O75360 226 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 BRI3O95415 125 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 TMEM50AO95807 157 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 METTL15P1P0C7V9 234 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 LGALS7P47929 136 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 HOXA1P49639 335 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-214ENST00000560402 BRWD1-AS2P59051 145 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 RAB11AP62491 216 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 SLC38A11Q08AI6 406 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 FXYD3Q14802 87 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 AKR1C8PQ5T2L2 129 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 DPPA3Q6W0C5 159 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 SSX9Q7RTT3 188 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 OR4A5Q8NH83 315 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 MS4A10Q96PG2 267 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 PARD6GQ9BYG4 376 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-214ENST00000560402 WFDC1Q9HC57 220 aa10.4□□□□□ -0.74
SMAD3-214ENST00000560402 HEYLQ9NQ87 328 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-214ENST00000560402 C15orf61A6NNL5 157 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 ATP5IP56385 69 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-214ENST00000560402 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 OR2G3Q8NGZ4 309 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 HARBI1Q96MB7 349 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 TM2D3Q9BRN9 247 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 TMEM147Q9BVK8 224 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 ZNF257Q9Y2Q1 563 aa10.39□□□□□ -0.75
SMAD3-214ENST00000560402 CNIH1O95406 144 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 OR9G9P0C7N8 305 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 IGHV4-30-4P0DP06 118 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 ATP6V0CP27449 155 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 OR2B8PP59922 312 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 VMA21Q3ZAQ7 101 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 OR4A47Q6IF82 309 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 Q6ZRG5 221 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 PUSL1Q8N0Z8 303 aaKnown RBP10.38□□□□□ -0.75
SMAD3-214ENST00000560402 BSCL2Q96G97 398 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-214ENST00000560402 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-214ENST00000560402 QTRT1Q9BXR0 403 aaKnown RBP10.38□□□□□ -0.75
SMAD3-214ENST00000560402 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 BET1LQ9NYM9 111 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 STARD9Q9P2P6 4700 aa10.38□□□□□ -0.75
SMAD3-214ENST00000560402 IFNA10P01566 189 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 HBE1P02100 147 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 HSPE1P61604 102 aaKnown RBP10.37□□□□□ -0.75
SMAD3-214ENST00000560402 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-214ENST00000560402 PJVKQ0ZLH3 352 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 OR8G2PQ6IF36 304 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 TMEM182Q6ZP80 229 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-214ENST00000560402 CCDC28AQ8IWP9 274 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 OR5B3Q8NH48 314 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 NARS2Q96I59 477 aaKnown RBP10.37□□□□□ -0.75
SMAD3-214ENST00000560402 USMG5Q96IX5 58 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 PBDC1Q9BVG4 233 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 GGACTQ9BVM4 153 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 PLEKHA3Q9HB20 300 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 UQCC1Q9NVA1 299 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 C19orf73Q9NVV2 129 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
SMAD3-214ENST00000560402 CSMD3Q7Z407 3707 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 C17orf112F2Z3M2 114 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 UPK2O00526 184 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 CRYGBP07316 175 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 LINC00205P59089 165 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 SERF2P84101 59 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 KLF5Q13887 457 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-214ENST00000560402 LCN12Q6JVE5 192 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 ZNF343Q6P1L6 599 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 Q8N1Y9 231 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 SPATA25Q9BR10 227 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 COMMD5Q9GZQ3 224 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 HRH4Q9H3N8 390 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 TMEM14BQ9NUH8 114 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 OR51B2Q9Y5P1 312 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
SMAD3-214ENST00000560402 UBE2L5PA0A1B0GUS4 154 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 KBTBD11O94819 623 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 MBP02144 154 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 GTSCR1Q86UQ5 136 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 VKORC1L1Q8N0U8 176 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 OR5T1Q8NG75 326 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 FAM213BQ8TBF2 198 aa10.35□□□□□ -0.75
SMAD3-214ENST00000560402 WDR61Q9GZS3 305 aaKnown RBP10.35□□□□□ -0.75
SMAD3-214ENST00000560402 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
SMAD3-214ENST00000560402 MPDU1O75352 247 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 IFNA4P05014 189 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 NPY1RP25929 384 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 PRCDQ00LT1 54 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 PEA15Q15121 130 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 FAM209BQ5JX69 171 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms