RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	GNG7	O60262	68 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TSC22D2	O75157	780 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	FOLR2	P14207	255 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	CBLN1	P23435	193 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	OPRK1	P41145	380 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	GGNBP1	Q5YKI7	109 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	UNQ9165/PRO28630	Q6UXU0	137 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	RBKS	Q9H477	322 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	UFC1	Q9Y3C8	167 aa		10.38	□□□□□ -0.75
CHRNB4-204	ENST00000559849	FAM90A26	D6RGX4	464 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	NDUFA4	O00483	81 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	GP9	P14770	177 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	ELL	P55199	621 aa	Predicted RBP	10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	REL	Q04864	619 aa	Predicted RBP	10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	ADAMTSL5	Q6ZMM2	481 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	UXS1	Q8NBZ7	420 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TMEM213	A2RRL7	107 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	SMLR1	H3BR10	107 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	IFNA10	P01566	189 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	IFNA21	P01568	189 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	ATP5I	P56385	69 aa	Predicted RBP	10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	OR2K2	Q8NGT1	345 aa		10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TECR	Q9NZ01	308 aa	Known RBP	10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	LSM4	Q9Y4Z0	139 aa	Known RBP	10.37	□□□□□ -0.75
CHRNB4-204	ENST00000559849	KRBOX1	C9JBD0	128 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	MED6	O75586	246 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	ADAP1	O75689	374 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	NPY1R	P25929	384 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	MLANA	Q16655	118 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TM4SF20	Q53R12	229 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	LCN12	Q6JVE5	192 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	DYNLRB2	Q8TF09	96 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	MITD1	Q8WV92	249 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TMEM190	Q8WZ59	177 aa		10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849	MRPL27	Q9P0M9	148 aa	Known RBP	10.36	□□□□□ -0.75
CHRNB4-204	ENST00000559849		F8W036	122 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TMEM50A	O95807	157 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	NUP62	P37198	522 aa	Predicted RBP	10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	DEFB114	Q30KQ6	69 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	C12orf57	Q99622	126 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	DAZ1	Q9NQZ3	744 aa	Known RBP	10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	CD300E	Q496F6	205 aa	Predicted RBP	10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	ETFRF1	Q6IPR1	90 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	OR4X1	Q8NH49	305 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TMEM170A	Q8WVE7	144 aa		10.35	□□□□□ -0.75
CHRNB4-204	ENST00000559849		K7EMT4	169 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	GOSR2	O14653	212 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	CLN5	O75503	358 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	YIF1A	O95070	293 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	C8orf88	P0DMB2	117 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	EDN2	P20800	178 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	CACNG8	Q8WXS5	425 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	CIB3	Q96Q77	187 aa	Predicted RBP	10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	C20orf24	Q9BUV8	137 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	SMAD5-AS1	Q9Y6J3	95 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	IZUMO1R	A6ND01	250 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	C15orf62	A8K5M9	175 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	MPTX1	A8MV57	137 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	SYNGR2	O43760	224 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	SCGB2A1	O75556	95 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	GIP	P09681	153 aa	Predicted RBP	10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	SLC25A4	P12235	298 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	C11orf87	Q6NUJ2	197 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TMEM116	Q8NCL8	245 aa		10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	SAV1	Q9H4B6	383 aa	Predicted RBP	10.34	□□□□□ -0.75
CHRNB4-204	ENST00000559849	TRAV30	A0A087WSZ9	112 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	SNAPIN	O95295	136 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	SIX6	O95475	246 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	IFNA4	P05014	189 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	H2BFS	P57053	126 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	ID3	Q02535	119 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	CLRN3	Q8NCR9	226 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	OR2T35	Q8NGX2	323 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	ST8SIA2	Q92186	375 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	OR10C1	Q96KK4	312 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	MAGT1	Q9H0U3	335 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	MRPL36	Q9P0J6	103 aa	Known RBP	10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	MLX	Q9UH92	298 aa		10.33	□□□□□ -0.76
CHRNB4-204	ENST00000559849	IAPP	P10997	89 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	RAP2B	P61225	183 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	RPP30	P78346	268 aa	Known RBP	10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	PRSS54	Q6PEW0	395 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	IGHV3OR16-8	A0A075B7F1	116 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	ZNF785	A8K8V0	405 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	WRB	O00258	174 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	BTF3	P20290	206 aa	Known RBP	10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	NKX2-1	P43699	371 aa	Predicted RBP	10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	RAB11A	P62491	216 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	GTSCR1	Q86UQ5	136 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849		Q8N1Y9	231 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	EIF4E3	Q8N5X7	224 aa	Known RBP	10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	OR4D5	Q8NGN0	318 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	ZNF414	Q96IQ9	312 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	LINC00052	Q96N35	136 aa		10.32	□□□□□ -0.76
CHRNB4-204	ENST00000559849	RND2	P52198	227 aa		10.31	□□□□□ -0.76
CHRNB4-204	ENST00000559849	SST	P61278	116 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms