RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 PLA2G1BP04054 148 aaKnown RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 AKR1C4P17516 323 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 GPR183P32249 361 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 PSG3Q16557 428 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 Q8N402 240 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 LSM10Q969L4 123 aaKnown RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 EEF1AKMT3Q96AZ1 226 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 SOSTQ9BQB4 213 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 SAV1Q9H4B6 383 aaPredicted RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 C5orf66Q9H5L9 145 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 NDUFA4L2Q9NRX3 87 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 CLEC5AQ9NY25 188 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 V9GYH0 126 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 A0A0G2JRQ6 117 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 BRI3O95415 125 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 IGHV3-48P01763 117 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 H2AFB2P0C5Z0 115 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 INSL3P51460 131 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 MFAP2P55001 183 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 HERV-K104P63124 156 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 VAMP3Q15836 100 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 ZNF79Q15937 498 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 ZNF57Q68EA5 555 aaPredicted RBP7.35□□□□□ -1.23
SPG11-214ENST00000558989 TOMM5Q8N4H5 51 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 GDPD1Q8N9F7 314 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 OR6Q1Q8NGQ2 317 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 TMEM56Q96MV1 263 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 TSC22D3Q99576 134 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 PRRT1Q99946 306 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 SCP2D1Q9UJQ7 156 aa7.35□□□□□ -1.23
SPG11-214ENST00000558989 IGHV3OR16-8A0A075B7F1 116 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 SMCO3A2RU48 225 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 OR2T8A6NH00 312 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 NPIPB6E9PJ23 425 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 IFNA17P01571 189 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 GP9P14770 177 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 HIST1H1BP16401 226 aaKnown RBP7.34□□□□□ -1.23
SPG11-214ENST00000558989 TMED4Q7Z7H5 227 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 LHFPL5Q8TAF8 219 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 NAA60Q9H7X0 242 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 TMEM14BQ9NUH8 114 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 FKBP11Q9NYL4 201 aa7.34□□□□□ -1.23
SPG11-214ENST00000558989 CSDC2Q9Y534 153 aaKnown RBP7.34□□□□□ -1.23
SPG11-214ENST00000558989 IZUMO1RA6ND01 250 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 FBLL1A6NHQ2 334 aaKnown RBP7.34□□□□□ -1.24
SPG11-214ENST00000558989 TEX46H3BTG2 121 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 GGCTO75223 188 aaKnown RBP7.34□□□□□ -1.24
SPG11-214ENST00000558989 ETV6P41212 452 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.24
SPG11-214ENST00000558989 C11orf87Q6NUJ2 197 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 IL34Q6ZMJ4 242 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 TMEM217Q8N7C4 229 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 SLC35G3Q8N808 338 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 OR5B3Q8NH48 314 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 PDCD10Q9BUL8 212 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 PLEKHA3Q9HB20 300 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 THYN1Q9P016 225 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 TNFRSF18Q9Y5U5 241 aa7.34□□□□□ -1.24
SPG11-214ENST00000558989 F11RQ9Y624 299 aaKnown RBP7.34□□□□□ -1.24
SPG11-214ENST00000558989 RAB19A4D1S5 217 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 RS1O15537 224 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 INPP1P49441 399 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 HOXA1P49639 335 aaPredicted RBP7.33□□□□□ -1.24
SPG11-214ENST00000558989 KLF9Q13886 244 aaPredicted RBP7.33□□□□□ -1.24
SPG11-214ENST00000558989 Q56UQ5 140 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 PLET1Q6UQ28 207 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 AKAP14Q86UN6 197 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 ZNF502Q8TBZ5 544 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 DYNLRB2Q8TF09 96 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 TMEM230Q96A57 120 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 CXorf58Q96LI9 332 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 TMEM222Q9H0R3 208 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 RPH3ALQ9UNE2 315 aa7.33□□□□□ -1.24
SPG11-214ENST00000558989 CRYM-AS1A6NIL9 109 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 CYB5BO43169 146 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 ZNF207O43670 478 aaKnown RBP7.32□□□□□ -1.24
SPG11-214ENST00000558989 ATG12O94817 140 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 IGLV1-51P01701 117 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 FAUP35544 74 aaKnown RBP7.32□□□□□ -1.24
SPG11-214ENST00000558989 CDC34P49427 236 aaPredicted RBP7.32□□□□□ -1.24
SPG11-214ENST00000558989 UBE2G2P60604 165 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 HSPE1P61604 102 aaKnown RBP7.32□□□□□ -1.24
SPG11-214ENST00000558989 PRCDQ00LT1 54 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 THOC7Q6I9Y2 204 aaKnown RBP7.32□□□□□ -1.24
SPG11-214ENST00000558989 Q6ZRM9 215 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 SGPP2Q8IWX5 399 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 OR1L4Q8NGR5 311 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 SGK494Q96LW2 274 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 NAGKQ9UJ70 344 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 PLA2G2DQ9UNK4 145 aa7.32□□□□□ -1.24
SPG11-214ENST00000558989 TRBV7-1A0A0A6YYK4 115 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 FGF2P09038 288 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 AP3S2P59780 193 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 ERHP84090 104 aaKnown RBP7.31□□□□□ -1.24
SPG11-214ENST00000558989 SURF2Q15527 256 aaPredicted RBP7.31□□□□□ -1.24
SPG11-214ENST00000558989 GUCA2BQ16661 112 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 UNQ9165/PRO28630Q6UXU0 137 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 ADAMTSL5Q6ZMM2 481 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms