RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DNASE2O00115 360 aaPredicted RBP5.4□□□□□ -1.54
SPG11-213ENST00000558988 DEFB4AO15263 64 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 RAB3DO95716 219 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 BMI1P35226 326 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 OPRK1P41145 380 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 NPBWR1P48145 328 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 UCP3P55916 312 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 HSPE1P61604 102 aaKnown RBP5.4□□□□□ -1.54
SPG11-213ENST00000558988 DUSP18Q8NEJ0 188 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 OR13C8Q8NGS7 320 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 MARCH1Q8TCQ1 289 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 RRNAD1Q96FB5 475 aaKnown RBP5.4□□□□□ -1.54
SPG11-213ENST00000558988 GALNT14Q96FL9 552 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 GINS3Q9BRX5 216 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 NXF2Q9GZY0 626 aaKnown RBP5.4□□□□□ -1.54
SPG11-213ENST00000558988 FBXL17Q9UF56 701 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 PUS1Q9Y606 427 aaKnown RBP eCLIP5.4□□□□□ -1.54
SPG11-213ENST00000558988 A0A0B4J293 547 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 NUPR2A6NF83 97 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 MPTX1A8MV57 137 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 DFFBO76075 338 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 ATG12O94817 140 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 APOHP02749 345 aaPredicted RBP5.39□□□□□ -1.55
SPG11-213ENST00000558988 OR5AC1P0C628 307 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 SMIM18P0DKX4 95 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 ZNF182P17025 639 aaPredicted RBP5.39□□□□□ -1.55
SPG11-213ENST00000558988 SUB1P53999 127 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPG11-213ENST00000558988 TAS2R19P59542 299 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 DEFB131AP59861 70 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 PAFAH1B2P68402 229 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 TNFRSF9Q07011 255 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 CTF1Q16619 201 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 MORN5Q5VZ52 161 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 TOMM20LQ6UXN7 152 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 ZNF600Q6ZNG1 722 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 Q6ZWC4 215 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 GPR141Q7Z602 305 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 CCDC71LQ8N9Z2 235 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 STXBP6Q8NFX7 210 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 ZFAND1Q8TCF1 268 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 TMEM230Q96A57 120 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 ABHD1Q96SE0 405 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 MAP6D1Q9H9H5 199 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 MTFP1Q9UDX5 166 aa5.39□□□□□ -1.55
SPG11-213ENST00000558988 C14orf166Q9Y224 244 aaKnown RBP5.39□□□□□ -1.55
SPG11-213ENST00000558988 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 KIR2DL5BA0A0G2JN68 375 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 KIR2DL5BA0A0G2JPC4 375 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 A0A0G2JRQ6 117 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 A0A1B0GU03 582 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 CEBPZOSA8MTT3 80 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 UBE2CO00762 179 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 CTDSP2O14595 271 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 GABARAPO95166 117 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 CA1P00915 261 aaPredicted RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 RNASE2P10153 161 aaKnown RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 RND3P61587 244 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 MEF2DQ14814 521 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 SPCS2Q15005 226 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 TIGITQ495A1 244 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 STEAP1BQ6NZ63 245 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 CEMP1Q6PRD7 247 aaPredicted RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 KIR2DL5AQ8N109 375 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 ARRDC1Q8N5I2 433 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 FAM24BQ8N5W8 94 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 TMEM217Q8N7C4 229 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 ZNF114Q8NC26 417 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 OR11H2Q8NH07 326 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 KIR2DL5BQ8NHK3 375 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 TERB2Q8NHR7 220 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 RNF183Q96D59 192 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 ZNF486Q96H40 463 aaPredicted RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 ZNF414Q96IQ9 312 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 OR10C1Q96KK4 312 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 TXN2Q99757 166 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 RARRES2Q99969 163 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 CSTL1Q9H114 145 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 MS4A6AQ9H2W1 248 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 HEYLQ9NQ87 328 aaPredicted RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 FAM212BQ9NTI7 297 aaPredicted RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 MRPL36Q9P0J6 103 aaKnown RBP5.38□□□□□ -1.55
SPG11-213ENST00000558988 CACNG5Q9UF02 275 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 TP53TG1Q9Y2A0 90 aa5.38□□□□□ -1.55
SPG11-213ENST00000558988 KMT2CQ8NEZ4 4911 aaKnown RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 KNCNA6PVL3 124 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 DISC1C4P0D8 188 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 SCGB2A1O75556 95 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 TMEM50AO95807 157 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 ZNF688P0C7X2 276 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 TBPP20226 339 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 NPPCP23582 126 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 NANOS2P60321 138 aaKnown RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 RAB32Q13637 225 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 IL18Q14116 193 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 TMEM268Q5VZI3 342 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 LHFPL1Q86WI0 220 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 CLVS1Q8IUQ0 354 aaPredicted RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 CADM3Q8N126 398 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 TMEM229BQ8NBD8 167 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms