RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DPPA3Q6W0C5 159 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 AAED1Q7RTV5 226 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SMIM15Q7Z3B0 74 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SMIM20Q8N5G0 67 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SIGLECL1Q8N7X8 197 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.92□□□□□ -2.26
VPS13C-207ENST00000558919 WFDC11Q8NEX6 87 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 OR8D4Q8NGM9 314 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 PFN4Q8NHR9 129 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SPACA4Q8TDM5 124 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 GPER1Q99527 375 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SERPINI1Q99574 410 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 PBDC1Q9BVG4 233 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SH3BGRL3Q9H299 93 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 BOLA2Q9H3K6 86 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 RNF122Q9H9V4 155 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 C8orf4Q9NR00 106 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 MED29Q9NX70 200 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 CKLFQ9UBR5 152 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SS18L2Q9UHA2 77 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 SSR3Q9UNL2 185 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 UFC1Q9Y3C8 167 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 DISP1Q96F81 1524 aa0.92□□□□□ -2.26
VPS13C-207ENST00000558919 A0A1B0GV72 72 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 DUXBA0A1W2PPF3 345 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 C19orf84I3L1E1 186 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 SDCBPO00560 298 aaPredicted RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 MFSD11O43934 449 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 PFDN1O60925 122 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 PGLYRP1O75594 196 aaPredicted RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 APOA2P02652 100 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 PMP2P02689 132 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 GPX1P07203 203 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 HTR1AP08908 422 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 IDO1P14902 403 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 SRIP30626 198 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 SRP14P37108 136 aaKnown RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 AQP4P55087 323 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 RRN3P1Q2M238 152 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 SCGB2B2Q4G0G5 96 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 Q6ZRN7 208 aaPredicted RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 GRINAQ7Z429 371 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 C10orf126Q8N4M7 172 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 LINC00471Q8N535 108 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 ZNF439Q8NDP4 499 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 OR4E2Q8NGC2 313 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 OR52R1Q8NGF1 315 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 OR5A1Q8NGJ0 315 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 ZNF625Q96I27 306 aaPredicted RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 HIST1H2BLQ99880 126 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 MRPL40Q9NQ50 206 aaKnown RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 ACER3Q9NUN7 267 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 EPDR1Q9UM22 224 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 BAIAP2Q9UQB8 552 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 AMMECR1Q9Y4X0 333 aaPredicted RBP0.91□□□□□ -2.26
VPS13C-207ENST00000558919 NEO1Q92859 1461 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 HECW2Q9P2P5 1572 aa0.91□□□□□ -2.26
VPS13C-207ENST00000558919 FMN1Q68DA7 1419 aa0.9□□□□□ -2.26
VPS13C-207ENST00000558919 MIA2Q96PC5 1412 aa0.9□□□□□ -2.26
VPS13C-207ENST00000558919 MEIKINA0A087WXM9 373 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 C7orf71A4D174 169 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 RIIAD1A6NNX1 92 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 H0YJX3 145 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 TAX1BP3O14907 124 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 NAPSAO96009 420 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 IFNA21P01568 189 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 CRHP06850 196 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 RPSAP08865 295 aaKnown RBP0.9□□□□□ -2.27
VPS13C-207ENST00000558919 CRYGAP11844 174 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 COX6A1P12074 109 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM155Q4W5P6 130 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 BCL2L15Q5TBC7 163 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 LCN15Q6UWW0 184 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 C7orf65Q6ZTY9 151 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 DEFB128Q7Z7B8 93 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 DHFR2Q86XF0 187 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 OR8B3Q8NGG8 313 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 WFDC5Q8TCV5 224 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 MALSU1Q96EH3 234 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 YPEL2Q96QA6 119 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 LYSMD1Q96S90 227 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 PBOV1Q9GZY1 135 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 CST9LQ9H4G1 147 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 TONSLQ96HA7 1378 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 SCAF11Q99590 1463 aaKnown RBP0.9□□□□□ -2.27
VPS13C-207ENST00000558919 DOCK5Q9H7D0 1870 aa0.9□□□□□ -2.27
VPS13C-207ENST00000558919 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
VPS13C-207ENST00000558919 CCDC88AQ3V6T2 1871 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 KIF24Q5T7B8 1368 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 TRGV10A0A0A0MS01 117 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 FUOMA2VDF0 154 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM212A6NML5 194 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 GPR31O00270 319 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 GGCTO75223 188 aaKnown RBP0.89□□□□□ -2.27
VPS13C-207ENST00000558919 C1QCP02747 245 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 ANGP03950 147 aaKnown RBP0.89□□□□□ -2.27
VPS13C-207ENST00000558919 GLRXP35754 106 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 TFAMQ00059 246 aaKnown RBP0.89□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF345Q14585 488 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 NNATQ16517 81 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms