RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 IGHV2-26A0A0B4J1V2 119 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 PNMA8CA0A1B0GUJ8 204 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 A0A1W2PRG6 482 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 OR6C6A6NF89 314 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 EFCAB10A6NFE3 127 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 CCDC160A6NGH7 325 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 CENPBD1B2RD01 187 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 H7C2Y5 167 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 SLC16A7O60669 478 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 HPRT1P00492 218 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 IFNGP01579 166 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 RBP4P02753 201 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 CDK1P06493 297 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 CD14P08571 375 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 LGALS1P09382 135 aaKnown RBP3.78□□□□□ -1.8
RTF1-204ENST00000558117 PET100P0DJ07 73 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 SPI1P17947 270 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 PSMB9P28065 219 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 FUSP35637 526 aaKnown RBP eCLIP3.78□□□□□ -1.8
RTF1-204ENST00000558117 RPS27P42677 84 aaKnown RBP3.78□□□□□ -1.8
RTF1-204ENST00000558117 GLP1RP43220 463 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 RPL5P46777 297 aaKnown RBP3.78□□□□□ -1.8
RTF1-204ENST00000558117 APOC4P55056 127 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 LSM3P62310 102 aaKnown RBP3.78□□□□□ -1.8
RTF1-204ENST00000558117 MXD1Q05195 221 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 FMODQ06828 376 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 KRR1Q13601 381 aaKnown RBP3.78□□□□□ -1.8
RTF1-204ENST00000558117 BSXQ3C1V8 233 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 MESTQ5EB52 335 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 CNIH2Q6PI25 160 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 ZNF561Q8N587 486 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 ZFP41Q8N8Y5 198 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 Q96MT0 163 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 TEAD3Q99594 435 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 ABCG5Q9H222 651 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 DUSP21Q9H596 190 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 CMC2Q9NRP2 79 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 XCL2Q9UBD3 114 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 ST3GAL6Q9Y274 331 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 KLF12Q9Y4X4 402 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 TRAV10A0A0B4J240 114 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 DAPL1A0PJW8 107 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 CD300LBA8K4G0 201 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 J3QLW9 94 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 GABRPO00591 440 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 XKRYO14609 159 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 MPZL2O60487 215 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 HSPB1P04792 205 aaKnown RBP3.77□□□□□ -1.81
RTF1-204ENST00000558117 TGFBR1P36897 503 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 RND2P52198 227 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 GTF2A1P52655 376 aaPredicted RBP3.77□□□□□ -1.81
RTF1-204ENST00000558117 RPL18AQ02543 176 aaKnown RBP3.77□□□□□ -1.81
RTF1-204ENST00000558117 CLINT1Q14677 625 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 C2orf83Q53S99 150 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 GCSAMLQ5JQS6 135 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 XAF1Q6GPH4 301 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 RPL13AP3Q6NVV1 102 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 CLVS1Q8IUQ0 354 aaPredicted RBP3.77□□□□□ -1.81
RTF1-204ENST00000558117 OR6V1Q8N148 313 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 OR5T1Q8NG75 326 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 OR1M1Q8NGA1 313 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 OR2K2Q8NGT1 345 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 OR2T27Q8NH04 317 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 CREB3L1Q96BA8 519 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 FLYWCH2Q96CP2 140 aaKnown RBP3.77□□□□□ -1.81
RTF1-204ENST00000558117 ADTRPQ96IZ2 230 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 ISG20L2Q9H9L3 353 aaKnown RBP3.77□□□□□ -1.81
RTF1-204ENST00000558117 ACOT13Q9NPJ3 140 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 IFT46Q9NQC8 304 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 PLEKHJ1Q9NW61 149 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 FKBP14Q9NWM8 211 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 BAIAP2Q9UQB8 552 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 OR51B2Q9Y5P1 312 aa3.77□□□□□ -1.81
RTF1-204ENST00000558117 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 A0A1W2PQL4 384 aaPredicted RBP3.76□□□□□ -1.81
RTF1-204ENST00000558117 GGT3PA6NGU5 568 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 ZFP92A6NM28 416 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 OR2AT4A6NND4 320 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 LY6LH3BQJ8 138 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 ZNF593O00488 134 aaPredicted RBP3.76□□□□□ -1.81
RTF1-204ENST00000558117 CDIPTO14735 213 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 AGPAT2O15120 278 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 IFNA21P01568 189 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 IFNA17P01571 189 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 TSPAN19P0C672 248 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 LIMS3P0CW19 117 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 LIMS4P0CW20 117 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 ZNF728P0DKX0 622 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 CTLA4P16410 223 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 BTCP35070 178 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 GABRA2P47869 451 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 GABARAPL2P60520 117 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 CXCR4P61073 352 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 NUTF2P61970 127 aaKnown RBP3.76□□□□□ -1.81
RTF1-204ENST00000558117 RSPO1Q2MKA7 263 aaPredicted RBP3.76□□□□□ -1.81
RTF1-204ENST00000558117 OR2B11Q5JQS5 317 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 C1orf100Q5SVJ3 147 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 NXNL2Q5VZ03 156 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 MRPL52Q86TS9 123 aaKnown RBP3.76□□□□□ -1.81
RTF1-204ENST00000558117 GID4Q8IVV7 300 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms