RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 IGLV1-51P01701 117 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 CSN3P07498 182 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 MYOD1P15172 320 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 RPL27AP46776 148 aaKnown RBP5.74□□□□□ -1.49
SPG11-205ENST00000558080 ERVK-16P61578 105 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 IL34Q6ZMJ4 242 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 PUSL1Q8N0Z8 303 aaKnown RBP5.74□□□□□ -1.49
SPG11-205ENST00000558080 Q8N1Y9 231 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 TTC9CQ8N5M4 171 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 DMBX1Q8NFW5 382 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 TMEM167AQ8TBQ9 72 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 SLC25A31Q9H0C2 315 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 CACNG5Q9UF02 275 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 FBXL7Q9UJT9 491 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 BORCS7-ASMTA0A0B4J1R7 106 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 TRBV9A0A0B4J1U6 114 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 A0A1B0GW64 132 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 RPS10-NUDT3A0A1W2PQS6 291 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 LINC00862A6NCI5 91 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 IZUMO1RA6ND01 250 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 FAM223BA6NKX1 122 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 TEX22C9J3V5 150 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 PPP5D1E7EU14 171 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 SSSCA1O60232 199 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 MED6O75586 246 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 JTBO76095 146 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 NDUFB8O95169 186 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 HPRT1P00492 218 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 HRASP01112 189 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 IGHV3-23P01764 117 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 REG1AP05451 166 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 P0C879 139 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 IGHV4-30-4P0DP06 118 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 AREGP15514 252 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 S100A1P23297 94 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 TAS2R30P59541 319 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 POLR2GP62487 172 aaKnown RBP eCLIP5.73□□□□□ -1.49
SPG11-205ENST00000558080 BAXQ07812 192 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 C15orf32Q32M92 178 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 EIF5AL1Q6IS14 154 aaKnown RBP5.73□□□□□ -1.49
SPG11-205ENST00000558080 ALKAL2Q6UX46 152 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 H2BFWTQ7Z2G1 175 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 FAM223AQ8IWN6 122 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 BAP18Q8IXM2 172 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 SLC7A5P1Q8MH63 180 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 Q8N1X5 172 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 OR2C3Q8N628 320 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 NECAP1Q8NC96 275 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 VSTM2AQ8TAG5 236 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 LRRC20Q8TCA0 184 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 RCHY1Q96PM5 261 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 RAB40CQ96S21 281 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 SLC25A32Q9H2D1 315 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 C11orf1Q9H5F2 150 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 CYTL1Q9NRR1 136 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 LYRM2Q9NU23 88 aaPredicted RBP5.73□□□□□ -1.49
SPG11-205ENST00000558080 FBXL17Q9UF56 701 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 CACFD1Q9UGQ2 172 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 S4R3C0 116 aa5.73□□□□□ -1.49
SPG11-205ENST00000558080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.72□□□□□ -1.49
SPG11-205ENST00000558080 TRAV3A0A0B4J244 114 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 CGB1A6NKQ9 187 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 NPIPB5A8MRT5 1133 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 SYNGR2O43760 224 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 KRASP01116 189 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 NQO2P16083 231 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 MAS1LP35410 378 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 G6PCP35575 357 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 CAV2P51636 162 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 RPL8P62917 257 aaKnown RBP5.72□□□□□ -1.49
SPG11-205ENST00000558080 EWSR1Q01844 656 aaKnown RBP eCLIP5.72□□□□□ -1.49
SPG11-205ENST00000558080 OR4A47Q6IF82 309 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 MAGT1Q9H0U3 335 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 ZMAT4Q9H898 229 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.72□□□□□ -1.49
SPG11-205ENST00000558080 PEMTQ9UBM1 199 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 ZNF257Q9Y2Q1 563 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 SELENOKQ9Y6D0 94 aa5.72□□□□□ -1.49
SPG11-205ENST00000558080 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
SPG11-205ENST00000558080 IGSF23A1L1A6 192 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 FAM24AA6NFZ4 105 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 MARCH11A6NNE9 402 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 UPK2O00526 184 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 GGCTO75223 188 aaKnown RBP5.71□□□□□ -1.5
SPG11-205ENST00000558080 SCAF4O95104 1147 aaKnown RBP5.71□□□□□ -1.5
SPG11-205ENST00000558080 OR2C1O95371 312 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 SLPIP03973 132 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 DEFA4P12838 97 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 EDN2P20800 178 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 TNFRSF9Q07011 255 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 ZNF266Q14584 549 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 IZUMO4Q1ZYL8 232 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 RPL7L1Q6DKI1 246 aaKnown RBP5.71□□□□□ -1.5
SPG11-205ENST00000558080 LCN12Q6JVE5 192 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 CLEC19AQ6UXS0 136 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 ADAMTSL5Q6ZMM2 481 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 Q6ZRM9 215 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 STX12Q86Y82 276 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 TMEM252Q8N6L7 170 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 UBAC2Q8NBM4 344 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms