RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ELLP55199 621 aaPredicted RBP19.42■□□□□ 0.7
SMAD6-202ENST00000557916 TIGITQ495A1 244 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 TMEM14EPQ6UXP3 125 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 ZNF600Q6ZNG1 722 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 OR1S2Q8NGQ3 325 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 ZMAT5Q9UDW3 170 aaKnown RBP19.42■□□□□ 0.7
SMAD6-202ENST00000557916 MEGF8Q7Z7M0 2845 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 IGHV3OR16-8A0A075B7F1 116 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 IGKV1-17P01599 117 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 IGLC1P0CG04 106 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 OR8G2PQ6IF36 304 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 ADAMTSL5Q6ZMM2 481 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 HAPLN4Q86UW8 402 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 C11orf1Q9H5F2 150 aa19.41■□□□□ 0.7
SMAD6-202ENST00000557916 IGLV1-51P01701 117 aa19.4■□□□□ 0.7
SMAD6-202ENST00000557916 METTL15P1P0C7V9 234 aa19.4■□□□□ 0.7
SMAD6-202ENST00000557916 CBLN1P23435 193 aa19.4■□□□□ 0.7
SMAD6-202ENST00000557916 MED28Q9H204 178 aa19.4■□□□□ 0.7
SMAD6-202ENST00000557916 PMS2P5A8MQ11 134 aa19.39■□□□□ 0.69
SMAD6-202ENST00000557916 BCAP31P51572 246 aa19.39■□□□□ 0.69
SMAD6-202ENST00000557916 DEFA6Q01524 100 aa19.39■□□□□ 0.69
SMAD6-202ENST00000557916 TOMM20LQ6UXN7 152 aa19.39■□□□□ 0.69
SMAD6-202ENST00000557916 WDR89Q96FK6 387 aaPredicted RBP19.39■□□□□ 0.69
SMAD6-202ENST00000557916 DAZ1Q9NQZ3 744 aaKnown RBP19.39■□□□□ 0.69
SMAD6-202ENST00000557916 PUS1Q9Y606 427 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMAD6-202ENST00000557916 K7EMT4 169 aa19.38■□□□□ 0.69
SMAD6-202ENST00000557916 CCNKO75909 580 aa19.38■□□□□ 0.69
SMAD6-202ENST00000557916 PRB2P02812 416 aaPredicted RBP19.38■□□□□ 0.69
SMAD6-202ENST00000557916 CAV2P51636 162 aa19.38■□□□□ 0.69
SMAD6-202ENST00000557916 LRRC37A5PQ49AS3 106 aa19.38■□□□□ 0.69
SMAD6-202ENST00000557916 MARC2Q969Z3 335 aa19.38■□□□□ 0.69
SMAD6-202ENST00000557916 ZNF207O43670 478 aaKnown RBP19.37■□□□□ 0.69
SMAD6-202ENST00000557916 RLN2P04090 185 aa19.37■□□□□ 0.69
SMAD6-202ENST00000557916 ACOT7LQ6ZUV0 252 aa19.37■□□□□ 0.69
SMAD6-202ENST00000557916 DYNLRB2Q8TF09 96 aa19.37■□□□□ 0.69
SMAD6-202ENST00000557916 MRPL27Q9P0M9 148 aaKnown RBP19.37■□□□□ 0.69
SMAD6-202ENST00000557916 DNAH3Q8TD57 4116 aa19.37■□□□□ 0.69
SMAD6-202ENST00000557916 DEDDO75618 318 aa19.36■□□□□ 0.69
SMAD6-202ENST00000557916 C8orf88P0DMB2 117 aa19.36■□□□□ 0.69
SMAD6-202ENST00000557916 CXCL3P19876 107 aa19.36■□□□□ 0.69
SMAD6-202ENST00000557916 YPEL3P61236 119 aaPredicted RBP19.36■□□□□ 0.69
SMAD6-202ENST00000557916 FCN2Q15485 313 aa19.36■□□□□ 0.69
SMAD6-202ENST00000557916 OR10P1Q8NGE3 313 aa19.36■□□□□ 0.69
SMAD6-202ENST00000557916 FAM24AA6NFZ4 105 aa19.35■□□□□ 0.69
SMAD6-202ENST00000557916 ZFP92A6NM28 416 aa19.35■□□□□ 0.69
SMAD6-202ENST00000557916 Q8WTZ3 238 aa19.35■□□□□ 0.69
SMAD6-202ENST00000557916 PPP1R1CQ8WVI7 109 aa19.35■□□□□ 0.69
SMAD6-202ENST00000557916 GINS3Q9BRX5 216 aa19.35■□□□□ 0.69
SMAD6-202ENST00000557916 ZFAND3Q9H8U3 227 aa19.35■□□□□ 0.69
SMAD6-202ENST00000557916 LYRM2Q9NU23 88 aaPredicted RBP19.35■□□□□ 0.69
SMAD6-202ENST00000557916 DEFB114Q30KQ6 69 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 AURKAIP1Q9NWT8 199 aaPredicted RBP19.34■□□□□ 0.69
SMAD6-202ENST00000557916 TECRQ9NZ01 308 aaKnown RBP19.34■□□□□ 0.69
SMAD6-202ENST00000557916 ZNF256Q9Y2P7 627 aaPredicted RBP19.34■□□□□ 0.69
SMAD6-202ENST00000557916 IGKV1D-37A0A075B6S9 117 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 SMCO3A2RU48 225 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 RRAS2P62070 204 aaPredicted RBP19.34■□□□□ 0.69
SMAD6-202ENST00000557916 DLK1P80370 383 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 AKR1C1Q04828 323 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 OR11H7Q8NGC8 314 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 MLXQ9UH92 298 aa19.34■□□□□ 0.69
SMAD6-202ENST00000557916 TRAV14DV4A0A0A6YYC5 116 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 E5RGE8 158 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 H0YIZ8 118 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 TOMM40O96008 361 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 RD3LP0DJH9 198 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 ARL16Q0P5N6 197 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 CD300EQ496F6 205 aaPredicted RBP19.33■□□□□ 0.68
SMAD6-202ENST00000557916 THAP8Q8NA92 274 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 OR2K2Q8NGT1 345 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 OR5AC2Q9NZP5 309 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 SELENOKQ9Y6D0 94 aa19.33■□□□□ 0.68
SMAD6-202ENST00000557916 IGKV1OR2-108A0A075B7D4 117 aa19.32■□□□□ 0.68
SMAD6-202ENST00000557916 BTNL8Q6UX41 500 aa19.32■□□□□ 0.68
SMAD6-202ENST00000557916 TMEM252Q8N6L7 170 aa19.32■□□□□ 0.68
SMAD6-202ENST00000557916 TRGV9Q99603 122 aa19.32■□□□□ 0.68
SMAD6-202ENST00000557916 IGHV7-4-1A0A0J9YVY3 117 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 IGSF23A1L1A6 192 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 CST7O76096 145 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 MPC2O95563 127 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 PSG1P11464 419 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 SULT1A1P50225 295 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 ZNF90Q03938 601 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 LCN12Q6JVE5 192 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 TMEM144Q7Z5S9 345 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 PRR25Q96S07 402 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 SMPXQ9UHP9 88 aa19.31■□□□□ 0.68
SMAD6-202ENST00000557916 IGHV3-49A0A0A0MS15 119 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 IZUMO1RA6ND01 250 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 SCAF4O95104 1147 aaKnown RBP19.3■□□□□ 0.68
SMAD6-202ENST00000557916 FABP1P07148 127 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 PET100P0DJ07 73 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 STX12Q86Y82 276 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 GGACTQ9BVM4 153 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 NPVFQ9HCQ7 196 aa19.3■□□□□ 0.68
SMAD6-202ENST00000557916 WI2-2373I1.2A0A1W2PRP0 233 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 FNDC10F2Z333 226 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 IL4P05112 153 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 GP9P14770 177 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 P2RY1P47900 373 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms