RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 L7N2F9 121 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 CCNKO75909 580 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 IGKV1-17P01599 117 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 CBLN1P23435 193 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 GPX4P36969 197 aaPredicted RBP10.87□□□□□ -0.67
USP3-205ENST00000557884 VAMP2P63027 116 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 GAMTQ14353 236 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 ZNF600Q6ZNG1 722 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 OR1S2Q8NGQ3 325 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
USP3-205ENST00000557884 ZMAT5Q9UDW3 170 aaKnown RBP10.87□□□□□ -0.67
USP3-205ENST00000557884 ZNF256Q9Y2P7 627 aaPredicted RBP10.87□□□□□ -0.67
USP3-205ENST00000557884 PUS1Q9Y606 427 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP3-205ENST00000557884 IGHV3-49A0A0A0MS15 119 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 SCGB2A1O75556 95 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 IGLC1P0CG04 106 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 ELLP55199 621 aaPredicted RBP10.86□□□□□ -0.67
USP3-205ENST00000557884 RAB32Q13637 225 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 OR8G2PQ6IF36 304 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 WDR89Q96FK6 387 aaPredicted RBP10.86□□□□□ -0.67
USP3-205ENST00000557884 DAZ1Q9NQZ3 744 aaKnown RBP10.86□□□□□ -0.67
USP3-205ENST00000557884 MLXQ9UH92 298 aa10.86□□□□□ -0.67
USP3-205ENST00000557884 TRAV30A0A087WSZ9 112 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 PRSS46E5RG02 174 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 K7EIL1 84 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 BCAP31P51572 246 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 H2BFSP57053 126 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 TAS2R30P59541 319 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 IL15RAQ13261 267 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 CD300EQ496F6 205 aaPredicted RBP10.85□□□□□ -0.67
USP3-205ENST00000557884 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 ACOT7LQ6ZUV0 252 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
USP3-205ENST00000557884 IGHV3OR16-13A0A075B7E8 117 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 IGHV3-74A0A0B4J1X5 117 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 SMCO3A2RU48 225 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 ZFP92A6NM28 416 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 TSC22D2O75157 780 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 C8orf88P0DMB2 117 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 GP9P14770 177 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 CAV2P51636 162 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 RRAS2P62070 204 aaPredicted RBP10.84□□□□□ -0.67
USP3-205ENST00000557884 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 MARC2Q969Z3 335 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 NMES1Q9C002 83 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 C11orf1Q9H5F2 150 aa10.84□□□□□ -0.67
USP3-205ENST00000557884 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
USP3-205ENST00000557884 IGKV1D-37A0A075B6S9 117 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 FAM24AA6NFZ4 105 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 PMS2P5A8MQ11 134 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 K7EMT4 169 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 PVALBP20472 110 aaPredicted RBP10.83□□□□□ -0.68
USP3-205ENST00000557884 AKR1C1Q04828 323 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 OXA1LQ15070 435 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 Q8WTZ3 238 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 GINS3Q9BRX5 216 aa10.83□□□□□ -0.68
USP3-205ENST00000557884 TECRQ9NZ01 308 aaKnown RBP10.83□□□□□ -0.68
USP3-205ENST00000557884 TRAV14DV4A0A0A6YYC5 116 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 IGHV7-4-1A0A0J9YVY3 117 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 CST7O76096 145 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
USP3-205ENST00000557884 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 YPEL3P61236 119 aaPredicted RBP10.82□□□□□ -0.68
USP3-205ENST00000557884 ZNF90Q03938 601 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 ARL16Q0P5N6 197 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 OR2F1Q13607 317 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 FCN2Q15485 313 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 MED28Q9H204 178 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
USP3-205ENST00000557884 IGKV1OR2-108A0A075B7D4 117 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 DEDDO75618 318 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 TOMM40O96008 361 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 APOHP02749 345 aaPredicted RBP10.81□□□□□ -0.68
USP3-205ENST00000557884 IL4P05112 153 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 PSG1P11464 419 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 CXCL3P19876 107 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 CYCSP99999 105 aaKnown RBP10.81□□□□□ -0.68
USP3-205ENST00000557884 DEFB121Q5J5C9 76 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 OR10P1Q8NGE3 313 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 OR2K2Q8NGT1 345 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 PPP1R1CQ8WVI7 109 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 RHPN1-AS1Q9BWJ2 59 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 OR5AC2Q9NZP5 309 aa10.81□□□□□ -0.68
USP3-205ENST00000557884 IGSF23A1L1A6 192 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 ZNF785A8K8V0 405 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 H0YIZ8 118 aa10.8□□□□□ -0.68
USP3-205ENST00000557884 CHEK1O14757 476 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms