RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 K7EPK0 472 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 SIX6O95475 246 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 ADMP35318 185 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 RAB40CQ96S21 281 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 CHRDL1Q9BU40 450 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 HYDINQ4G0P3 5121 aa12.53□□□□□ -0.4
NEK9-211ENST00000557673 IZUMO1RA6ND01 250 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 PRSS46E5RG02 174 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 GNG7O60262 68 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 OR2C1O95371 312 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 IFNA4P05014 189 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 SLC25A4P12235 298 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 EDN2P20800 178 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 NPBWR1P48145 328 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 PAX9P55771 341 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 H2BFSP57053 126 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 S100A10P60903 97 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 RPP30P78346 268 aaKnown RBP12.52□□□□□ -0.41
NEK9-211ENST00000557673 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 OR4X1Q8NH49 305 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 ZNF414Q96IQ9 312 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 MGAT4CQ9UBM8 478 aa12.52□□□□□ -0.41
NEK9-211ENST00000557673 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.41
NEK9-211ENST00000557673 LSM5Q9Y4Y9 91 aaKnown RBP12.52□□□□□ -0.41
NEK9-211ENST00000557673 A8MWP6 167 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 TSC22D2O75157 780 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 CTSGP08311 255 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 RND2P52198 227 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 TAS2R30P59541 319 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 RAB11AP62491 216 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 RAB32Q13637 225 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 MLANAQ16655 118 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 GPHB5Q86YW7 130 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 TMEM190Q8WZ59 177 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 NMES1Q9C002 83 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 ZNF436Q9C0F3 470 aaPredicted RBP12.51□□□□□ -0.41
NEK9-211ENST00000557673 PSENENQ9NZ42 101 aa12.51□□□□□ -0.41
NEK9-211ENST00000557673 PAIP2BQ9ULR5 123 aaKnown RBP12.51□□□□□ -0.41
NEK9-211ENST00000557673 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 LGALS9O00182 355 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 NUPL2O15504 423 aaKnown RBP12.5□□□□□ -0.41
NEK9-211ENST00000557673 CLN5O75503 358 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 ETFRF1Q6IPR1 90 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 TMEM14EPQ6UXP3 125 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 UNQ9165/PRO28630Q6UXU0 137 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
NEK9-211ENST00000557673 C2orf70A6NJV1 201 aa12.49□□□□□ -0.41
NEK9-211ENST00000557673 GPX4P36969 197 aaPredicted RBP12.49□□□□□ -0.41
NEK9-211ENST00000557673 CD81P60033 236 aa12.49□□□□□ -0.41
NEK9-211ENST00000557673 RELQ04864 619 aaPredicted RBP12.49□□□□□ -0.41
NEK9-211ENST00000557673 LINC00322Q6ZN03 302 aaPredicted RBP12.49□□□□□ -0.41
NEK9-211ENST00000557673 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
NEK9-211ENST00000557673 TMEM213A2RRL7 107 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 PMS2P5A8MQ11 134 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 L7N2F9 121 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 NDUFA4O00483 81 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 CCNKO75909 580 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 IGKV1-17P01599 117 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 FOLR2P14207 255 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 CXCL3P19876 107 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 VAMP2P63027 116 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
NEK9-211ENST00000557673 CD300EQ496F6 205 aaPredicted RBP12.48□□□□□ -0.41
NEK9-211ENST00000557673 FAM106AQ4KMX7 169 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 ACOT7LQ6ZUV0 252 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 OR11H7Q8NGC8 314 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 WDR89Q96FK6 387 aaPredicted RBP12.48□□□□□ -0.41
NEK9-211ENST00000557673 ACY3Q96HD9 319 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 NEURL2Q9BR09 285 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 MED28Q9H204 178 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 RETNQ9HD89 108 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 SELENOKQ9Y6D0 94 aa12.48□□□□□ -0.41
NEK9-211ENST00000557673 ZNF320A2RRD8 509 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 DEDDO75618 318 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 METTL15P1P0C7V9 234 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 PVALBP20472 110 aaPredicted RBP12.47□□□□□ -0.41
NEK9-211ENST00000557673 GAMTQ14353 236 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 FCN2Q15485 313 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 LRRC37A5PQ49AS3 106 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 OR1S2Q8NGQ3 325 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
NEK9-211ENST00000557673 TRAV30A0A087WSZ9 112 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 OR10J1P30954 320 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.41
NEK9-211ENST00000557673 DEFB114Q30KQ6 69 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 ZNF600Q6ZNG1 722 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 PPP1R1CQ8WVI7 109 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 FAM110AQ9BQ89 295 aa12.46□□□□□ -0.41
NEK9-211ENST00000557673 LYRM2Q9NU23 88 aaPredicted RBP12.46□□□□□ -0.41
NEK9-211ENST00000557673 CBLN1P23435 193 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms