RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 IGKV1-17P01599 117 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 FGL1Q08830 312 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
NEDD1-213ENST00000557644 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 GAR1Q9NY12 217 aaKnown RBP11.7□□□□□ -0.54
NEDD1-213ENST00000557644 OR10J1P30954 320 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 SLC38A11Q08AI6 406 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 TIGITQ495A1 244 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 ST6GAL2Q96JF0 529 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 IGKV1D-37A0A075B6S9 117 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
NEDD1-213ENST00000557644 SLC25A31Q9H0C2 315 aa11.69□□□□□ -0.54
NEDD1-213ENST00000557644 FXYD6-FXYD2A0A087WZ82 144 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 DLK1P80370 383 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 AKR1C1Q04828 323 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 MGAM2Q2M2H8 2515 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 ZNF320A2RRD8 509 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 PRR31Q5SQ13 230 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 GPHB5Q86YW7 130 aa11.68□□□□□ -0.54
NEDD1-213ENST00000557644 RCC1LQ96I51 464 aaKnown RBP11.68□□□□□ -0.54
NEDD1-213ENST00000557644 ZFP92A6NM28 416 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 EDN2P20800 178 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 ZNF90Q03938 601 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 CD300CQ08708 224 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 OR5C1Q8NGR4 320 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 OVOL1O14753 267 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 YIF1AO95070 293 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 CD33P20138 364 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 S100A11P31949 105 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 HBG1P69891 147 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 HBG2P69892 147 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 CLINT1Q14677 625 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 C1QL4Q86Z23 238 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 OR1S2Q8NGQ3 325 aa11.67□□□□□ -0.54
NEDD1-213ENST00000557644 TRAV30A0A087WSZ9 112 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
NEDD1-213ENST00000557644 BAXQ07812 192 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 FAM106AQ4KMX7 169 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 ZNF546Q86UE3 836 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 THAP8Q8NA92 274 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 OR11H4Q8NGC9 324 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 SMIM3Q9BZL3 60 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 HSPB11Q9Y547 144 aa11.66□□□□□ -0.54
NEDD1-213ENST00000557644 PUS1Q9Y606 427 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEDD1-213ENST00000557644 OR9G4Q8NGQ1 327 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 NPVFQ9HCQ7 196 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 NDUFA4O00483 81 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.54
NEDD1-213ENST00000557644 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 UQCC1Q9NVA1 299 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.54
NEDD1-213ENST00000557644 UBE2L5PA0A1B0GUS4 154 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 RNF222A6NCQ9 220 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 FNDC10F2Z333 226 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 PSG1P11464 419 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 GATA2P23769 480 aaPredicted RBP11.64□□□□□ -0.55
NEDD1-213ENST00000557644 OR2F1Q13607 317 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 IL34Q6ZMJ4 242 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
NEDD1-213ENST00000557644 AKAP14Q86UN6 197 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 TMEM190Q8WZ59 177 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 ARPC5O15511 151 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 IGLL1P15814 213 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 AP2S1P53680 142 aaPredicted RBP11.64□□□□□ -0.55
NEDD1-213ENST00000557644 YPEL3P61236 119 aaPredicted RBP11.64□□□□□ -0.55
NEDD1-213ENST00000557644 REC114Q7Z4M0 266 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 TRGV9Q99603 122 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
NEDD1-213ENST00000557644 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
NEDD1-213ENST00000557644 LGALS9O00182 355 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 SCAF4O95104 1147 aaKnown RBP11.63□□□□□ -0.55
NEDD1-213ENST00000557644 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 TCTE3Q8IZS6 198 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 WFDC1Q9HC57 220 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 TMEM213A2RRL7 107 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 TOMM40O96008 361 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-213ENST00000557644 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
NEDD1-213ENST00000557644 SEC14L6B5MCN3 397 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 ATP6V1FQ16864 119 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 Q8WTZ3 238 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 MGST2Q99735 147 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms