RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 WDR12Q9GZL7 423 aaKnown RBP6.21□□□□□ -1.42
NEDD1-211ENST00000557454 A0A075B6Q4 140 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 HTN1P15515 57 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 ERVK-16P61578 105 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 SPATA31B1PQ5VZV4 182 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 TPRA1Q86W33 373 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 WFDC10BQ8IUB3 73 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 C16orf74Q96GX8 76 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 TMPRSS5Q9H3S3 457 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 CCL28Q9NRJ3 127 aa6.2□□□□□ -1.42
NEDD1-211ENST00000557454 MRPL36Q9P0J6 103 aaKnown RBP6.2□□□□□ -1.42
NEDD1-211ENST00000557454 GAGE12BA1L429 117 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 ADAP1O75689 374 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 GAGE7O76087 117 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 GAGE12FP0CL80 117 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 GAGE12GP0CL81 117 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 GAGE12IP0CL82 117 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 EVI2AP22794 236 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 MAPK3P27361 379 aaPredicted RBP6.19□□□□□ -1.42
NEDD1-211ENST00000557454 PSMB3P49720 205 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 B2MP61769 119 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
NEDD1-211ENST00000557454 FLOT2Q14254 428 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 MLANAQ16655 118 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
NEDD1-211ENST00000557454 TIGITQ495A1 244 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 Q6ZS49 121 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 LRTM2Q8N967 370 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 RBPMSQ93062 196 aaKnown RBP6.19□□□□□ -1.42
NEDD1-211ENST00000557454 RAB3CQ96E17 227 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 CENPOQ9BU64 300 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 PLEKHA2Q9HB19 425 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 MRPS18AQ9NVS2 196 aaKnown RBP6.19□□□□□ -1.42
NEDD1-211ENST00000557454 COMMD9Q9P000 198 aa6.19□□□□□ -1.42
NEDD1-211ENST00000557454 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.18□□□□□ -1.42
NEDD1-211ENST00000557454 TRAV12-2A0A075B6T6 113 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 A8MTW9 85 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 IGKV1-17P01599 117 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 IGLV2-11P01706 119 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 CRYGDP07320 174 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 ID1P41134 155 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 PRCDQ00LT1 54 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 TMEM144Q7Z5S9 345 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 AMIGO2Q86SJ2 522 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 OR51H1Q8NH63 302 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 RNASE8Q8TDE3 154 aaKnown RBP6.18□□□□□ -1.42
NEDD1-211ENST00000557454 SECTM1Q8WVN6 248 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 GPR146Q96CH1 333 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 LINC01587Q99440 93 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 FGF20Q9NP95 211 aaPredicted RBP6.18□□□□□ -1.42
NEDD1-211ENST00000557454 DOK5Q9P104 306 aa6.18□□□□□ -1.42
NEDD1-211ENST00000557454 K7EP13 123 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 SOCS3O14543 225 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 BUB3O43684 328 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 CLN5O75503 358 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 SNAPC5O75971 98 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 TALDO1P37837 337 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 CLDN12P56749 244 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 TAS2R60P59551 318 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 CATR1Q13166 79 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 LYPD5Q6UWN5 251 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 BPIFB6Q8NFQ5 453 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 OR11H7Q8NGC8 314 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 LGALS14Q8TCE9 139 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 TMEM203Q969S6 136 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 FAM107BQ9H098 131 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 PRNDQ9UKY0 176 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 ICOSQ9Y6W8 199 aa6.17□□□□□ -1.42
NEDD1-211ENST00000557454 LECT2O14960 151 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 KRASP01116 189 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 FCER2P06734 321 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 CTXN2P0C2S0 81 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 HIST1H1DP16402 221 aaKnown RBP6.16□□□□□ -1.42
NEDD1-211ENST00000557454 G6PCP35575 357 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 ASAH1Q13510 395 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 ZIK1Q3SY52 487 aaPredicted RBP6.16□□□□□ -1.42
NEDD1-211ENST00000557454 XP32Q5T750 250 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 AADACL3Q5VUY0 350 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 C10orf126Q8N4M7 172 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 ZNF485Q8NCK3 441 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 TMEM263Q8WUH6 116 aaKnown RBP6.16□□□□□ -1.42
NEDD1-211ENST00000557454 PHYHIPQ92561 330 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 Q9HAA7 133 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 PLGRKTQ9HBL7 147 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 KLK11Q9UBX7 282 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 ELF5Q9UKW6 265 aaPredicted RBP6.16□□□□□ -1.42
NEDD1-211ENST00000557454 OAZ3Q9UMX2 235 aa6.16□□□□□ -1.42
NEDD1-211ENST00000557454 TRAV5A0A0B4J249 113 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 ZNF98A6NK75 572 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 SLC17A2O00624 439 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 GSTZ1O43708 216 aaPredicted RBP6.15□□□□□ -1.42
NEDD1-211ENST00000557454 SCGB2A1O75556 95 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 RLN2P04090 185 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 IL4P05112 153 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 MYL12AP19105 171 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 UCP1P25874 307 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 CNN1P51911 297 aaKnown RBP6.15□□□□□ -1.42
NEDD1-211ENST00000557454 CD300CQ08708 224 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms