RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ADMP35318 185 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 FCN2Q15485 313 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 GGNBP1Q5YKI7 109 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 C11orf87Q6NUJ2 197 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 OR4X1Q8NH49 305 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 CIB3Q96Q77 187 aaPredicted RBP10.42□□□□□ -0.74
VPS33B-206ENST00000557358 HSPB7Q9UBY9 170 aa10.42□□□□□ -0.74
VPS33B-206ENST00000557358 A0A1W2PS18 150 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 OR4C46A6NHA9 309 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 FAM90A26D6RGX4 464 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 ZNF207O43670 478 aaKnown RBP10.41□□□□□ -0.74
VPS33B-206ENST00000557358 TMEM50AO95807 157 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 IFNA4P05014 189 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 CMC4P56277 68 aaPredicted RBP10.41□□□□□ -0.74
VPS33B-206ENST00000557358 RAB11AP62491 216 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 PAFAH1B2P68402 229 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 BSXQ3C1V8 233 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 PVRIGQ6DKI7 326 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 C19orf73Q9NVV2 129 aa10.41□□□□□ -0.74
VPS33B-206ENST00000557358 IGHV3OR16-8A0A075B7F1 116 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 IGHV7-4-1A0A0J9YVY3 117 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 C5orf51A6NDU8 294 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 WRBO00258 174 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 TSPAN4O14817 238 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 EDN2P20800 178 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 NPPCP23582 126 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 BCAP31P51572 246 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 GSG1LQ6UXU4 331 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 OR11H7Q8NGC8 314 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 OR1S2Q8NGQ3 325 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 OR10C1Q96KK4 312 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 METTL26Q96S19 204 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 SPATA25Q9BR10 227 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 RBKSQ9H477 322 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 SMPXQ9UHP9 88 aa10.4□□□□□ -0.74
VPS33B-206ENST00000557358 PAIP2BQ9ULR5 123 aaKnown RBP10.4□□□□□ -0.74
VPS33B-206ENST00000557358 PUS1Q9Y606 427 aaKnown RBP eCLIP10.4□□□□□ -0.74
VPS33B-206ENST00000557358 FABP1P07148 127 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 CD7P09564 240 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 EIF2B2P49770 351 aaKnown RBP10.39□□□□□ -0.75
VPS33B-206ENST00000557358 RND2P52198 227 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 TOMM20LQ6UXN7 152 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 Q8WTZ3 238 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 CHAC2Q8WUX2 184 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 GRAMD2BQ96HH9 432 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 SLC35E1Q96K37 410 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 RCHY1Q96PM5 261 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
VPS33B-206ENST00000557358 MPTX1A8MV57 137 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 CHEK1O14757 476 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 SIX6O95475 246 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 CXCL3P19876 107 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 OR10J1P30954 320 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
VPS33B-206ENST00000557358 IAH1Q2TAA2 248 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-206ENST00000557358 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 ZBTB8BQ8NAP8 495 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-206ENST00000557358 ACY3Q96HD9 319 aa10.38□□□□□ -0.75
VPS33B-206ENST00000557358 FNDC4Q9H6D8 234 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-206ENST00000557358 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-206ENST00000557358 GPX4P36969 197 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-206ENST00000557358 H2BFSP57053 126 aa10.37□□□□□ -0.75
VPS33B-206ENST00000557358 HAGHQ16775 308 aa10.37□□□□□ -0.75
VPS33B-206ENST00000557358 PRSS54Q6PEW0 395 aa10.37□□□□□ -0.75
VPS33B-206ENST00000557358 C2orf50Q96LR7 162 aa10.37□□□□□ -0.75
VPS33B-206ENST00000557358 IGHV3-49A0A0A0MS15 119 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 SYNGR2O43760 224 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 PITX3O75364 302 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 GIPP09681 153 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-206ENST00000557358 NUP62P37198 522 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-206ENST00000557358 YPEL3P61236 119 aaPredicted RBP10.36□□□□□ -0.75
VPS33B-206ENST00000557358 CYCSP99999 105 aaKnown RBP10.36□□□□□ -0.75
VPS33B-206ENST00000557358 MLANAQ16655 118 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 TIGITQ495A1 244 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 OR4D5Q8NGN0 318 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 ASB13Q8WXK3 278 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 NPIPB3Q92617 1050 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 RNF2Q99496 336 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 TM2D3Q9BRN9 247 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 NMES1Q9C002 83 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 GSKIPQ9P0R6 139 aa10.36□□□□□ -0.75
VPS33B-206ENST00000557358 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
VPS33B-206ENST00000557358 ZFP92A6NM28 416 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 SCGB1D2O95969 90 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 RD3LP0DJH9 198 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 IAPPP10997 89 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 NKX2-1P43699 371 aaPredicted RBP10.35□□□□□ -0.75
VPS33B-206ENST00000557358 TCF24Q7RTU0 167 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 GGTLC1Q9BX51 225 aa10.35□□□□□ -0.75
VPS33B-206ENST00000557358 IGKV3-7A0A075B6H7 116 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms