RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 OR1S2Q8NGQ3 325 aa10.29□□□□□ -0.76
SHMT2-228ENST00000557302 ACY3Q96HD9 319 aa10.29□□□□□ -0.76
SHMT2-228ENST00000557302 RAB40CQ96S21 281 aa10.29□□□□□ -0.76
SHMT2-228ENST00000557302 STRAPQ9Y3F4 350 aaKnown RBP10.29□□□□□ -0.76
SHMT2-228ENST00000557302 H3BP45 60 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 ZNF207O43670 478 aaKnown RBP10.28□□□□□ -0.76
SHMT2-228ENST00000557302 PTTG1O95997 202 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 MBPP02686 304 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-228ENST00000557302 OR10J1P30954 320 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 TIGITQ495A1 244 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 DEFB121Q5J5C9 76 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 TOMM20LQ6UXN7 152 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 GSG1LQ6UXU4 331 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 NPIPB3Q92617 1050 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 ZNF414Q96IQ9 312 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 SLC35E1Q96K37 410 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 C2orf50Q96LR7 162 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 GINS3Q9BRX5 216 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 PSENENQ9NZ42 101 aa10.28□□□□□ -0.76
SHMT2-228ENST00000557302 PUS1Q9Y606 427 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHMT2-228ENST00000557302 IZUMO1RA6ND01 250 aa10.27□□□□□ -0.77
SHMT2-228ENST00000557302 IGKV1-17P01599 117 aa10.27□□□□□ -0.77
SHMT2-228ENST00000557302 IGLC1P0CG04 106 aa10.27□□□□□ -0.77
SHMT2-228ENST00000557302 BTNL8Q6UX41 500 aa10.27□□□□□ -0.77
SHMT2-228ENST00000557302 MLXQ9UH92 298 aa10.27□□□□□ -0.77
SHMT2-228ENST00000557302 RCL1Q9Y2P8 373 aaKnown RBP10.27□□□□□ -0.77
SHMT2-228ENST00000557302 TRAV14DV4A0A0A6YYC5 116 aa10.26□□□□□ -0.77
SHMT2-228ENST00000557302 GOSR2O14653 212 aa10.26□□□□□ -0.77
SHMT2-228ENST00000557302 TAS2R30P59541 319 aa10.26□□□□□ -0.77
SHMT2-228ENST00000557302 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-228ENST00000557302 GAMTQ14353 236 aa10.26□□□□□ -0.77
SHMT2-228ENST00000557302 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
SHMT2-228ENST00000557302 LSM5Q9Y4Y9 91 aaKnown RBP10.26□□□□□ -0.77
SHMT2-228ENST00000557302 LSM4Q9Y4Z0 139 aaKnown RBP10.26□□□□□ -0.77
SHMT2-228ENST00000557302 SELENOKQ9Y6D0 94 aa10.26□□□□□ -0.77
SHMT2-228ENST00000557302 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 K7EPK0 472 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 L7N2F9 121 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 SSNA1O43805 119 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 TSC22D2O75157 780 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 PAX9P55771 341 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 VAMP2P63027 116 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
SHMT2-228ENST00000557302 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 Q8WTZ3 238 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 SMPXQ9UHP9 88 aa10.25□□□□□ -0.77
SHMT2-228ENST00000557302 TRAV25A0A0B4J276 109 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 C7orf66A4D0T2 115 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 ZFP92A6NM28 416 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 PVALBP20472 110 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-228ENST00000557302 BMI1P35226 326 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 S100A10P60903 97 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 LAMTOR1Q6IAA8 161 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 OR8G2PQ6IF36 304 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 TMEM14EPQ6UXP3 125 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 ACOT7LQ6ZUV0 252 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 WDR89Q96FK6 387 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-228ENST00000557302 RHPN1-AS1Q9BWJ2 59 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 SMAD5-AS1Q9Y6J3 95 aa10.24□□□□□ -0.77
SHMT2-228ENST00000557302 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 ZNF785A8K8V0 405 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 CHEK1O14757 476 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
SHMT2-228ENST00000557302 SIX6O95475 246 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 TOMM40O96008 361 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 FABP1P07148 127 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 METTL15P1P0C7V9 234 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 RD3LP0DJH9 198 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 NPPCP23582 126 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 IL15RAQ13261 267 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 METTL26Q96S19 204 aa10.23□□□□□ -0.77
SHMT2-228ENST00000557302 SMCO3A2RU48 225 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 IL4P05112 153 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 PSG1P11464 419 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 BCAP31P51572 246 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 CD81P60033 236 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 AKR1C1Q04828 323 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 RAB32Q13637 225 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 THAP8Q8NA92 274 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 OR10P1Q8NGE3 313 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 NARS2Q96I59 477 aaKnown RBP10.22□□□□□ -0.77
SHMT2-228ENST00000557302 RNF2Q99496 336 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 TRGV9Q99603 122 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 TMEM231Q9H6L2 316 aa10.22□□□□□ -0.77
SHMT2-228ENST00000557302 IGKV1D-37A0A075B6S9 117 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 A0A1W2PS18 150 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 PMS2P5A8MQ11 134 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 TSPAN4O14817 238 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 CCNKO75909 580 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 CAV2P51636 162 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 DLK1P80370 383 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 CYCSP99999 105 aaKnown RBP10.21□□□□□ -0.77
SHMT2-228ENST00000557302 ZNF90Q03938 601 aa10.21□□□□□ -0.77
SHMT2-228ENST00000557302 RGS21Q2M5E4 152 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms