RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FAM231CP0DMU5 169 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 HLA-DMBP28068 263 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 HRH1P35367 487 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 EIF2B2P49770 351 aaKnown RBP6.26□□□□□ -1.41
VRK1-206ENST00000557222 AP2S1P53680 142 aaPredicted RBP6.26□□□□□ -1.41
VRK1-206ENST00000557222 RND3P61587 244 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 TSPAN5P62079 268 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 FHL2Q14192 279 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 PHLDA2Q53GA4 152 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 LEMD1Q68G75 181 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 OR4X1Q8NH49 305 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 GPX8Q8TED1 209 aa6.26□□□□□ -1.41
VRK1-206ENST00000557222 PINX1Q96BK5 328 aaKnown RBP6.26□□□□□ -1.41
VRK1-206ENST00000557222 ZNF486Q96H40 463 aaPredicted RBP6.26□□□□□ -1.41
VRK1-206ENST00000557222 A0A1B0GU03 582 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 A0A1B0GVY2 172 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 HELTA6NFD8 242 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 CLN5O75503 358 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 P0C879 139 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 NPY1RP25929 384 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 Q6ZTC4 211 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 FAM24BQ8N5W8 94 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 POM121L12Q8N7R1 296 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 SAMD12Q8N8I0 201 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 CSNK1G2-AS1Q8NCQ2 148 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 DCANP1Q8TF63 244 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 MRGPRFQ96AM1 343 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 C1QTNF4Q9BXJ3 329 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 RABAC1Q9UI14 185 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 TBC1D24Q9ULP9 559 aa6.25□□□□□ -1.41
VRK1-206ENST00000557222 A0A0B4J293 547 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 SMIM31A0A1B0GVY4 71 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 B3GALNT1O75752 331 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 IGHV3-48P01763 117 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 RNASE2P10153 161 aaKnown RBP6.24□□□□□ -1.41
VRK1-206ENST00000557222 HLA-DMAP28067 261 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 RCVRNP35243 200 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 P2RY1P47900 373 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 NUTF2P61970 127 aaKnown RBP6.24□□□□□ -1.41
VRK1-206ENST00000557222 C21orf62-AS1Q17RA5 79 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 LGALS9BQ3B8N2 356 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 BSXQ3C1V8 233 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 SLC35G3Q8N808 338 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 STXBP6Q8NFX7 210 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 FAM210BQ96KR6 192 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 NDUFAF3Q9BU61 184 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 PDCD10Q9BUL8 212 aa6.24□□□□□ -1.41
VRK1-206ENST00000557222 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 IGHV3-66A0A0C4DH42 116 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 RPS10-NUDT3A0A1W2PQS6 291 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 IFNA17P01571 189 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 IGKV1-17P01599 117 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 IGKV1-5P01602 117 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 APOA1P02647 267 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 ZNF688P0C7X2 276 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 C4BPBP20851 252 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 YPEL3P61236 119 aaPredicted RBP6.23□□□□□ -1.41
VRK1-206ENST00000557222 AARDQ4LEZ3 155 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 Q6ZRM9 215 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 OR52E5Q8NH55 327 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 TMEM230Q96A57 120 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 RAB40CQ96S21 281 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 NEU1Q99519 415 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 ENY2Q9NPA8 101 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 CACFD1Q9UGQ2 172 aa6.23□□□□□ -1.41
VRK1-206ENST00000557222 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 HSPG2P98160 4391 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 TMEM189A5PLL7 270 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 SMIM9A6NGZ8 99 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 KNCNA6PVL3 124 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
VRK1-206ENST00000557222 SLC25A4P12235 298 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 TBPP20226 339 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 OPRK1P41145 380 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 HTR2BP41595 481 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 HOXA1P49639 335 aaPredicted RBP6.22□□□□□ -1.41
VRK1-206ENST00000557222 AKR1C2P52895 323 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 SPCS3P61009 180 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 SNRPD3P62318 126 aaKnown RBP6.22□□□□□ -1.41
VRK1-206ENST00000557222 DHRS2Q13268 280 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 NEDD8Q15843 81 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 C12orf74Q32Q52 190 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 ACTL10Q5JWF8 245 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 LHFPL1Q86WI0 220 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 FAM219AQ8IW50 185 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 ARRDC1Q8N5I2 433 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 OR1S2Q8NGQ3 325 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 RNASEH2CQ8TDP1 164 aaKnown RBP6.22□□□□□ -1.41
VRK1-206ENST00000557222 Q8WTZ3 238 aa6.22□□□□□ -1.41
VRK1-206ENST00000557222 FNDC4Q9H6D8 234 aaPredicted RBP6.22□□□□□ -1.41
VRK1-206ENST00000557222 C3orf85A0A1B0GTC6 90 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 TEX48A0A1B0GUV7 120 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 PRSS29PA6NIE9 313 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 RTL8CO15255 209 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 GSTZ1O43708 216 aaPredicted RBP6.21□□□□□ -1.42
VRK1-206ENST00000557222 UCP1P25874 307 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 ETV6P41212 452 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 PPP5CP53041 499 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms