RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 IL5P05113 134 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 IGLC1P0CG04 106 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 RND2P52198 227 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 YPEL3P61236 119 aaPredicted RBP8.04□□□□□ -1.12
LINC00239-201ENST00000556973 SPANXN5Q5MJ07 72 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 SLC16A13Q7RTY0 426 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 C12orf45Q8N5I9 185 aaPredicted RBP8.04□□□□□ -1.12
LINC00239-201ENST00000556973 ZBTB8BQ8NAP8 495 aaPredicted RBP8.04□□□□□ -1.12
LINC00239-201ENST00000556973 Q8WTZ3 238 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 NEURL2Q9BR09 285 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 SEC22CQ9BRL7 303 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 SELENOKQ9Y6D0 94 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 TSPAN4O14817 238 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 SCAF4O95104 1147 aaKnown RBP8.03□□□□□ -1.12
LINC00239-201ENST00000556973 IGKV1-17P01599 117 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 CD5P06127 495 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 NPPCP23582 126 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 OR10J1P30954 320 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 BMI1P35226 326 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 CD81P60033 236 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 POLR2GP62487 172 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC00239-201ENST00000556973 GAMTQ14353 236 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 TIGITQ495A1 244 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 NRARPQ7Z6K4 114 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 ACY3Q96HD9 319 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 SMIM8Q96KF7 97 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 SPAG8Q99932 426 aaPredicted RBP8.03□□□□□ -1.12
LINC00239-201ENST00000556973 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 GPN1Q9HCN4 374 aaPredicted RBP8.03□□□□□ -1.12
LINC00239-201ENST00000556973 C19orf73Q9NVV2 129 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 PSENENQ9NZ42 101 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 GSKIPQ9P0R6 139 aa8.03□□□□□ -1.12
LINC00239-201ENST00000556973 PAIP2BQ9ULR5 123 aaKnown RBP8.03□□□□□ -1.12
LINC00239-201ENST00000556973 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
LINC00239-201ENST00000556973 CD7P09564 240 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 FRMD6-AS1P0C7T7 363 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 TAS2R30P59541 319 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 SLC35E1Q96K37 410 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 RAB40CQ96S21 281 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 RNF2Q99496 336 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 MARVELD1Q9BSK0 173 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 TUBA4BQ9H853 241 aa8.02□□□□□ -1.13
LINC00239-201ENST00000556973 IGHV3-49A0A0A0MS15 119 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 A0A1W2PS18 150 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 C5orf51A6NDU8 294 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 SNRPGP15A8MWD9 76 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 FAM25EA8MYX2 175 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 OR11H12B2RN74 326 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 INMT-MINDY4F8WBC2 141 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 CCSO14618 274 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 SSSCA1O60232 199 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 PRAF2O60831 178 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 SCGB1D2O95969 90 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 TOMM40O96008 361 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 MBPP02686 304 aaPredicted RBP8.01□□□□□ -1.13
LINC00239-201ENST00000556973 RD3LP0DJH9 198 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 CRYBB3P26998 211 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 PAX9P55771 341 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 FAM90A2PQ658T7 463 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 GSG1LQ6UXU4 331 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 SBSPONQ8IVN8 264 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 NARS2Q96I59 477 aaKnown RBP8.01□□□□□ -1.13
LINC00239-201ENST00000556973 C2orf50Q96LR7 162 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 METTL26Q96S19 204 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 ASCL2Q99929 193 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 TMEM231Q9H6L2 316 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 VSIRQ9H7M9 311 aa8.01□□□□□ -1.13
LINC00239-201ENST00000556973 ZFP92A6NM28 416 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 PRSS46E5RG02 174 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 H3BP45 60 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 TSC22D2O75157 780 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 APOHP02749 345 aaPredicted RBP8□□□□□ -1.13
LINC00239-201ENST00000556973 FABP1P07148 127 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 PSG1P11464 419 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 CMC4P56277 68 aaPredicted RBP8□□□□□ -1.13
LINC00239-201ENST00000556973 PAFAH1B2P68402 229 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 DEFB125Q8N687 156 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 ST8SIA2Q92186 375 aa8□□□□□ -1.13
LINC00239-201ENST00000556973 IGKV1D-37A0A075B6S9 117 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 IGHV3OR16-13A0A075B7E8 117 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 IGHV3-74A0A0B4J1X5 117 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 OR4C46A6NHA9 309 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 PMS2P5A8MQ11 134 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 L7N2F9 121 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 IL4P05112 153 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 VAMP2P63027 116 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 LINC00322Q6ZN03 302 aaPredicted RBP7.99□□□□□ -1.13
LINC00239-201ENST00000556973 TCF24Q7RTU0 167 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 LILRB2Q8N423 598 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 THAP8Q8NA92 274 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 OR10P1Q8NGE3 313 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 OR51G1Q8NGK1 321 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 GRAMD2BQ96HH9 432 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 TRGV9Q99603 122 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 RCL1Q9Y2P8 373 aaKnown RBP7.99□□□□□ -1.13
LINC00239-201ENST00000556973 U3KQE9 123 aa7.99□□□□□ -1.13
LINC00239-201ENST00000556973 IGHV3-66A0A0C4DH42 116 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms