RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 RPL22L1Q6P5R6 122 aaKnown RBP3.85□□□□□ -1.79
ATXN3-245ENST00000556958 ZNF600Q6ZNG1 722 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 SCXQ7RTU7 201 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 TPRA1Q86W33 373 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 CCDC28AQ8IWP9 274 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 Q8N814 137 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 OR13F1Q8NGS4 319 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 ORAI1Q96D31 301 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 C5orf30Q96GV9 206 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 ABHD1Q96SE0 405 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 GINS4Q9BRT9 223 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 CHAC1Q9BUX1 264 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 DNAJC4Q9NNZ3 241 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 PSORS1C1Q9UIG5 152 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 AK3Q9UIJ7 227 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 DIMT1Q9UNQ2 313 aaKnown RBP3.85□□□□□ -1.79
ATXN3-245ENST00000556958 LY96Q9Y6Y9 160 aa3.85□□□□□ -1.79
ATXN3-245ENST00000556958 LRCOL1A6NCL2 159 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 NXPH4O95158 308 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 CDK1P06493 297 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 EVI2AP22794 236 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 CRYBB3P26998 211 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 HSPA13P48723 471 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 TDRG1Q3Y452 100 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 CCDC58Q4VC31 144 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 OR2B11Q5JQS5 317 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 HSD17B11Q8NBQ5 300 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 OR10W1Q8NGF6 305 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 OR4B1Q8NGF8 309 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 OR1L8Q8NGR8 309 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 TCTEX1D2Q8WW35 142 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 TMEM203Q969S6 136 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 SLC25A46Q96AG3 418 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 CYYR1Q96J86 154 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 HSD17B10Q99714 261 aaKnown RBP3.84□□□□□ -1.79
ATXN3-245ENST00000556958 CMSS1Q9BQ75 279 aaKnown RBP3.84□□□□□ -1.79
ATXN3-245ENST00000556958 HDHD3Q9BSH5 251 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-245ENST00000556958 TMEM59Q9BXS4 323 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 Q9H521 79 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 NDUFA13Q9P0J0 144 aa3.84□□□□□ -1.79
ATXN3-245ENST00000556958 TIMM8BQ9Y5J9 83 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-245ENST00000556958 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.8
ATXN3-245ENST00000556958 TRAV5A0A0B4J249 113 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF705GA8MUZ8 300 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF701M0R085 212 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-245ENST00000556958 UPK2O00526 184 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 OGG1O15527 345 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 SCGB2A1O75556 95 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 LALBAP00709 142 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 CD3GP09693 182 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 WNT4P56705 351 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 TIRAPP58753 221 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 WT1-ASQ06250 92 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 CD300CQ08708 224 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 UNC119Q13432 240 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 FCN2Q15485 313 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 TIMM50Q3ZCQ8 353 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 IGSF11Q5DX21 431 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 XAF1Q6GPH4 301 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 EBLN2Q6P2I7 272 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 FOXI2Q6ZQN5 318 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 NANOGP1Q8N7R0 232 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF709Q8N972 641 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 OR1P1Q8NH06 330 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 LSM10Q969L4 123 aaKnown RBP3.83□□□□□ -1.8
ATXN3-245ENST00000556958 DAZAP1Q96EP5 407 aaKnown RBP3.83□□□□□ -1.8
ATXN3-245ENST00000556958 IGF2BP2-AS1Q96M15 143 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 URM1Q9BTM9 101 aaKnown RBP3.83□□□□□ -1.8
ATXN3-245ENST00000556958 CABLES2Q9BTV7 478 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 MND1Q9BWT6 205 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 SCPEP1Q9HB40 452 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 PLCXD1Q9NUJ7 323 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 CACNG5Q9UF02 275 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 RAB26Q9ULW5 256 aa3.83□□□□□ -1.8
ATXN3-245ENST00000556958 RBMX2Q9Y388 322 aaKnown RBP3.83□□□□□ -1.8
ATXN3-245ENST00000556958 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 TRAV8-7A0A075B6U6 113 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 DENRO43583 198 aaKnown RBP3.82□□□□□ -1.8
ATXN3-245ENST00000556958 IGLV2-11P01706 119 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 ID1P41134 155 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 SUMO2P61956 95 aaKnown RBP3.82□□□□□ -1.8
ATXN3-245ENST00000556958 RPL30P62888 115 aaKnown RBP3.82□□□□□ -1.8
ATXN3-245ENST00000556958 SPHARQ15513 63 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 Q499Y3 187 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 LAIR2Q6ISS4 152 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 NKAIN3Q8N8D7 197 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 LRTM2Q8N967 370 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 CIRBP-AS1Q8TBR5 109 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 UFD1Q92890 307 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 TMEM56Q96MV1 263 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 HINT2Q9BX68 163 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 SLC35B3Q9H1N7 401 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 DCSTAMPQ9H295 470 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 SAV1Q9H4B6 383 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-245ENST00000556958 NRN1Q9NPD7 142 aa3.82□□□□□ -1.8
ATXN3-245ENST00000556958 BLOC1S6Q9UL45 172 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms