RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 OR1S2Q8NGQ3 325 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 SPAG8Q99932 426 aaPredicted RBP17.15■□□□□ 0.34
TDP1-216ENST00000556867 FAM240BA0A1B0GVZ2 78 aa17.14■□□□□ 0.33
TDP1-216ENST00000556867 CHEK1O14757 476 aa17.14■□□□□ 0.33
TDP1-216ENST00000556867 TIGITQ495A1 244 aa17.14■□□□□ 0.33
TDP1-216ENST00000556867 LAMTOR1Q6IAA8 161 aa17.14■□□□□ 0.33
TDP1-216ENST00000556867 RHPN1-AS1Q9BWJ2 59 aa17.14■□□□□ 0.33
TDP1-216ENST00000556867 MAGT1Q9H0U3 335 aa17.14■□□□□ 0.33
TDP1-216ENST00000556867 OR10J1P30954 320 aa17.13■□□□□ 0.33
TDP1-216ENST00000556867 ID3Q02535 119 aa17.13■□□□□ 0.33
TDP1-216ENST00000556867 OR4D5Q8NGN0 318 aa17.13■□□□□ 0.33
TDP1-216ENST00000556867 NPIPB3Q92617 1050 aa17.13■□□□□ 0.33
TDP1-216ENST00000556867 TUBA4BQ9H853 241 aa17.13■□□□□ 0.33
TDP1-216ENST00000556867 H2AFB2P0C5Z0 115 aa17.12■□□□□ 0.33
TDP1-216ENST00000556867 BMI1P35226 326 aa17.12■□□□□ 0.33
TDP1-216ENST00000556867 GPX4P36969 197 aaPredicted RBP17.12■□□□□ 0.33
TDP1-216ENST00000556867 YPEL3P61236 119 aaPredicted RBP17.12■□□□□ 0.33
TDP1-216ENST00000556867 RAB11AP62491 216 aa17.12■□□□□ 0.33
TDP1-216ENST00000556867 ACY3Q96HD9 319 aa17.12■□□□□ 0.33
TDP1-216ENST00000556867 RNF2Q99496 336 aa17.12■□□□□ 0.33
TDP1-216ENST00000556867 IGHV3-49A0A0A0MS15 119 aa17.11■□□□□ 0.33
TDP1-216ENST00000556867 WRBO00258 174 aa17.11■□□□□ 0.33
TDP1-216ENST00000556867 NKX2-1P43699 371 aaPredicted RBP17.11■□□□□ 0.33
TDP1-216ENST00000556867 RPP30P78346 268 aaKnown RBP17.11■□□□□ 0.33
TDP1-216ENST00000556867 IFITM3Q01628 133 aa17.11■□□□□ 0.33
TDP1-216ENST00000556867 ZNF431Q8TF32 576 aaPredicted RBP17.11■□□□□ 0.33
TDP1-216ENST00000556867 WFDC10AQ9H1F0 79 aa17.11■□□□□ 0.33
TDP1-216ENST00000556867 VSIRQ9H7M9 311 aa17.11■□□□□ 0.33
TDP1-216ENST00000556867 OR11H12B2RN74 326 aa17.1■□□□□ 0.33
TDP1-216ENST00000556867 DEFB125Q8N687 156 aa17.1■□□□□ 0.33
TDP1-216ENST00000556867 SLC35E1Q96K37 410 aa17.1■□□□□ 0.33
TDP1-216ENST00000556867 SEC22CQ9BRL7 303 aa17.1■□□□□ 0.33
TDP1-216ENST00000556867 U3KQK5 164 aa17.1■□□□□ 0.33
TDP1-216ENST00000556867 STAB2Q8WWQ8 2551 aa17.1■□□□□ 0.33
TDP1-216ENST00000556867 IGHV3OR16-13A0A075B7E8 117 aa17.09■□□□□ 0.33
TDP1-216ENST00000556867 IGHV3-74A0A0B4J1X5 117 aa17.09■□□□□ 0.33
TDP1-216ENST00000556867 POLR2GP62487 172 aaKnown RBP eCLIP17.09■□□□□ 0.33
TDP1-216ENST00000556867 IAH1Q2TAA2 248 aaPredicted RBP17.09■□□□□ 0.33
TDP1-216ENST00000556867 FAM90A2PQ658T7 463 aa17.09■□□□□ 0.33
TDP1-216ENST00000556867 ST8SIA2Q92186 375 aa17.09■□□□□ 0.33
TDP1-216ENST00000556867 METTL26Q96S19 204 aa17.09■□□□□ 0.33
TDP1-216ENST00000556867 HUWE1Q7Z6Z7 4374 aaKnown RBP17.08■□□□□ 0.33
TDP1-216ENST00000556867 APOHP02749 345 aaPredicted RBP17.08■□□□□ 0.32
TDP1-216ENST00000556867 CD5P06127 495 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 NPPCP23582 126 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 CRYBB3P26998 211 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 GAMTQ14353 236 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 LINC00322Q6ZN03 302 aaPredicted RBP17.08■□□□□ 0.32
TDP1-216ENST00000556867 ZBTB8BQ8NAP8 495 aaPredicted RBP17.08■□□□□ 0.32
TDP1-216ENST00000556867 ENKURQ8TC29 256 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 Q8WTZ3 238 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 TM2D3Q9BRN9 247 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 SRD5A3Q9H8P0 318 aa17.08■□□□□ 0.32
TDP1-216ENST00000556867 PAIP2BQ9ULR5 123 aaKnown RBP17.08■□□□□ 0.32
TDP1-216ENST00000556867 OR4C46A6NHA9 309 aa17.07■□□□□ 0.32
TDP1-216ENST00000556867 PRSS46E5RG02 174 aa17.07■□□□□ 0.32
TDP1-216ENST00000556867 TOMM40O96008 361 aa17.07■□□□□ 0.32
TDP1-216ENST00000556867 SPANXN5Q5MJ07 72 aa17.07■□□□□ 0.32
TDP1-216ENST00000556867 TMEM231Q9H6L2 316 aa17.07■□□□□ 0.32
TDP1-216ENST00000556867 STRAPQ9Y3F4 350 aaKnown RBP17.07■□□□□ 0.32
TDP1-216ENST00000556867 H3BP45 60 aa17.06■□□□□ 0.32
TDP1-216ENST00000556867 SSSCA1O60232 199 aa17.06■□□□□ 0.32
TDP1-216ENST00000556867 HAGHQ16775 308 aa17.06■□□□□ 0.32
TDP1-216ENST00000556867 TCF24Q7RTU0 167 aa17.06■□□□□ 0.32
TDP1-216ENST00000556867 C12orf45Q8N5I9 185 aaPredicted RBP17.06■□□□□ 0.32
TDP1-216ENST00000556867 A0A1W2PS18 150 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 CCSO14618 274 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 IL5P05113 134 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 RD3LP0DJH9 198 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 LILRB2Q8N423 598 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 SMIM8Q96KF7 97 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 FAM110AQ9BQ89 295 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 ZMAT4Q9H898 229 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 TENM3Q9P273 2699 aa17.05■□□□□ 0.32
TDP1-216ENST00000556867 IGKV1D-37A0A075B6S9 117 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 IGHV3-66A0A0C4DH42 116 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 RBMY1BA6NDE4 496 aaKnown RBP17.04■□□□□ 0.32
TDP1-216ENST00000556867 RBMY1EA6NEQ0 496 aaKnown RBP17.04■□□□□ 0.32
TDP1-216ENST00000556867 ZFP92A6NM28 416 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 SCGB1D2O95969 90 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 IL4P05112 153 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 RBMY1DP0C7P1 496 aaKnown RBP17.04■□□□□ 0.32
TDP1-216ENST00000556867 NARS2Q96I59 477 aaKnown RBP17.04■□□□□ 0.32
TDP1-216ENST00000556867 RCHY1Q96PM5 261 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 RAB40CQ96S21 281 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 PSENENQ9NZ42 101 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 GSKIPQ9P0R6 139 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 U3KQE9 123 aa17.04■□□□□ 0.32
TDP1-216ENST00000556867 PSG1P11464 419 aa17.03■□□□□ 0.32
TDP1-216ENST00000556867 PAX9P55771 341 aa17.03■□□□□ 0.32
TDP1-216ENST00000556867 USF2Q15853 346 aaPredicted RBP17.03■□□□□ 0.32
TDP1-216ENST00000556867 ODF3L2Q3SX64 289 aa17.03■□□□□ 0.32
TDP1-216ENST00000556867 THAP8Q8NA92 274 aa17.03■□□□□ 0.32
TDP1-216ENST00000556867 RCL1Q9Y2P8 373 aaKnown RBP17.03■□□□□ 0.32
TDP1-216ENST00000556867 DFFBO76075 338 aa17.02■□□□□ 0.32
TDP1-216ENST00000556867 MBPP02686 304 aaPredicted RBP17.02■□□□□ 0.32
TDP1-216ENST00000556867 HNRNPCP07910 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
TDP1-216ENST00000556867 P2RY1P47900 373 aa17.02■□□□□ 0.32
TDP1-216ENST00000556867 TAS2R30P59541 319 aa17.02■□□□□ 0.32
TDP1-216ENST00000556867 NRARPQ7Z6K4 114 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms