RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 FAM3BP58499 235 aaPredicted RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 ADORA2A-AS1P86434 159 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 IL13RA2Q14627 380 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 FAM106AQ4KMX7 169 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 IGFL3Q6UXB1 125 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 GAPTQ8N292 157 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 RPRMLQ8N4K4 120 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 CMTM2Q8TAZ6 248 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 KLF14Q8TD94 323 aaPredicted RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 SPATA25Q9BR10 227 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 NPFFR1Q9GZQ6 430 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 PLA2G2EQ9NZK7 142 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 FOXA2Q9Y261 457 aaPredicted RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 SPCS1Q9Y6A9 102 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 IGLV1-44P01699 117 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 IGLV2-14P01704 120 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 LINC00694P0DN24 101 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 PSG2P11465 335 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 UBE2NP61088 152 aaKnown RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 ATP5G2Q06055 141 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 GAGE2BQ13066 116 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 GAGE2EQ4V326 116 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 ABCA11PQ4W5N1 156 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF695Q8IW36 515 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 C3orf56Q8N813 242 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 RPEQ96AT9 228 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 TMEM222Q9H0R3 208 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF331Q9NQX6 463 aaPredicted RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 GAGE2DQ9UEU5 116 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 PRNDQ9UKY0 176 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 POLDIP2Q9Y2S7 368 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 C3orf85A0A1B0GTC6 90 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 A0A1B0GV50 99 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TAX1BP3O14907 124 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 OR2H2O95918 312 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 MOSP00540 346 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 CECR9P0C854 216 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 IGLC2P0DOY2 106 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 IGLC3P0DOY3 106 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 MST1LQ2TV78 715 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 RPL7L1Q6DKI1 246 aaKnown RBP4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TEX43Q6ZNM6 134 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 Q6ZR03 302 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 NEGR1Q7Z3B1 354 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 C10orf126Q8N4M7 172 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 C11orf1Q9H5F2 150 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF71Q9NQZ8 489 aaPredicted RBP4.19□□□□□ -1.74
TMEM260-210ENST00000556422 RCL1Q9Y2P8 373 aaKnown RBP4.19□□□□□ -1.74
TMEM260-210ENST00000556422 FAM215AQ9Y5M1 114 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 FAM208BQ5VWN6 2430 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 BORCS7-ASMTA0A0B4J1R7 106 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TRAV8-6A0A0B4J262 113 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 FAM236DA0A1B0GTK5 79 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 IGLC7A0M8Q6 106 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TEX22C9J3V5 150 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 FAM236CP0DP71 79 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 ORM2P19652 201 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 HERV-K104P61576 105 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 RND3P61587 244 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF146Q15072 292 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 MSMPQ1L6U9 139 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF324BQ6AW86 544 aaPredicted RBP4.19□□□□□ -1.74
TMEM260-210ENST00000556422 Q6ZS92 163 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 OR5AU1Q8NGC0 362 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 OR51G1Q8NGK1 321 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 MBD3L2Q8NHZ7 208 aaPredicted RBP4.19□□□□□ -1.74
TMEM260-210ENST00000556422 RTL8AQ9BWD3 113 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 PTPRQQ9UMZ3 2332 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TANC2Q9HCD6 1990 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 LRBAP50851 2863 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 PSPNO60542 156 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 FABP2P12104 132 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 EVI2AP22794 236 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 HLA-DRB3P79483 266 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 CD69Q07108 199 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 MPV17L2Q567V2 206 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 FAM159AQ6UWV7 190 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF497Q6ZNH5 498 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 SSX8Q7RTT4 187 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 TGIF2LYQ8IUE0 185 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 SIGLECL1Q8N7X8 197 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 PRADC1Q9BSG0 188 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 SFXN3Q9BWM7 321 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 CDH20Q9HBT6 801 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 CCL28Q9NRJ3 127 aa4.19□□□□□ -1.74
TMEM260-210ENST00000556422 RAI1Q7Z5J4 1906 aaPredicted RBP4.18□□□□□ -1.74
TMEM260-210ENST00000556422 IGHV1-18A0A0C4DH31 117 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 FAM231BA6NCW3 169 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 NPIPB11E5RHQ5 1161 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 FNDC10F2Z333 226 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 H3BUT2 72 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.18□□□□□ -1.74
TMEM260-210ENST00000556422 CD5LO43866 347 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 VPREB1P12018 145 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 MALP21145 153 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 NMSQ5H8A3 153 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 MRPL54Q6P161 138 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms