RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 RBFOX2O43251 390 aaKnown RBP eCLIP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HPRT1P00492 218 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 NRASP01111 189 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HBE1P02100 147 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OPN1SWP03999 348 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ADRA2AP08913 450 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4L2P0CJ85 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4L3P0CJ86 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4L5P0CJ88 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4L6P0CJ89 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4L7P0CJ90 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR12D1P0DN82 309 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 GGT1P19440 569 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 PYCR1P32322 319 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HRH1P35367 487 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RPL4P36578 427 aaKnown RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF83P51522 516 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 TAS2R30P59541 319 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HSPE1P61604 102 aaKnown RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 FMODQ06828 376 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF154Q13106 437 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF181Q2M3W8 571 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HLA-DRB5Q30154 266 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 Q5BKY6 102 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 PYY3Q5JQD4 70 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 CLEC12AQ5QGZ9 265 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF57Q68EA5 555 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 WDR82Q6UXN9 313 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 NAA40Q86UY6 237 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 CALHM3Q86XJ0 350 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 BPIFB2Q8N4F0 458 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR4M1Q8NGD0 313 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR5A2Q8NGI9 324 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR1L8Q8NGR8 309 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR13C8Q8NGS7 320 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 PIFOQ8TCI5 191 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 C10orf105Q8TEF2 133 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RDH5Q92781 318 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 MALSU1Q96EH3 234 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 NEURL3Q96EH8 262 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ADTRPQ96IZ2 230 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 SLC35G5Q96KT7 338 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 TP53RKQ96S44 253 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 CLCC1Q96S66 551 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RASL11BQ9BPW5 248 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF649Q9BS31 505 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 C1QTNF6Q9BXI9 259 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 NKX6-2Q9C056 277 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 C20orf85Q9H1P6 137 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 MS4A6AQ9H2W1 248 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR51I1Q9H343 314 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RNF167Q9H6Y7 350 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 TAF9BQ9HBM6 251 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 NOX3Q9HBY0 568 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RETNQ9HD89 108 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 GPR84Q9NQS5 396 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ACER3Q9NUN7 267 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RBFOX1Q9NWB1 397 aaKnown RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 IDI2-AS1Q9NZ38 188 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4Q9UBX2 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 NAT8BQ9UHF3 227 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 RAB22AQ9UL26 194 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ST3GAL6Q9Y274 331 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 CARHSP1Q9Y2V2 147 aaKnown RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 DSCAML1Q8TD84 2053 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 IGKV1D-42A0A075B6H8 117 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 A0A087WUU8 490 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 IGHV1-18A0A0C4DH31 117 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 CEACAM18A8MTB9 384 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 M0R1B8 84 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 AIPO00170 330 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 SULT2B1O00204 365 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 MFNGO00587 321 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 GNG7O60262 68 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 MRPS14O60783 128 aaKnown RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 NPIPB7O75200 414 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 CLIC3O95833 236 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 FABP3P05413 133 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 CRYBA1P05813 215 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 EVI2AP22794 236 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 NPY1RP25929 384 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 GRPRP30550 384 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 BRS3P32247 399 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 GABRA2P47869 451 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OR12D2P58182 307 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 LOXL1Q08397 574 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 FABP9Q0Z7S8 132 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 UNC119Q13432 240 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OR5I1Q13606 314 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 RAB35Q15286 201 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 NEDD8Q15843 81 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 SSX1Q16384 188 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 IAH1Q2TAA2 248 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 TP53I3Q53FA7 332 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 MRPL2Q5T653 305 aaKnown RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 TSPO2Q5TGU0 170 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 DUX4L9Q6RFH8 374 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OAFQ86UD1 273 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms